Dickeya fangzhongdai ND14b: LH89_15640
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Entry
LH89_15640 CDS
T03347
Name
(GenBank) lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ced01011
]
LH89_15640
Enzymes [BR:
ced01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LH89_15640
Peptidoglycan biosynthesis and degradation proteins [BR:
ced01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LH89_15640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
SLT_4
HEAT_EZ
Motif
Other DBs
NCBI-ProteinID:
AIR70563
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All DBs
Position
3513302..3515233
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AA seq
643 aa
AA seq
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MFKLGYWRYVAAALCLIGVSCQALADSLDEQRQRYQQIKSAWDNNQMDVVSQLMPTLRDY
PLYPYLEYRALTQDLSTVSEVQVKQFMASHPTLPAVRTLNNSFINELARRQDWNGLLAFS
PEQPKPVASLCNYLYAKIMVGQPQGVWEQTREIWLTGRSLPPTCDKLFSAWQQQGGLTSL
MVLERMRLAMDAGSAGLVNHLSRQLPADYKTITDALLRLQSNPKTIERFARSVGPTDFTR
RAVLSAFSRIARQDPDEARALLPQLIRLQKIRPQERQSMEDDIAWRLMGSDTTEEQALWR
DAVILRSASAPLLERRVRMALGQGDRPGLKQWMARLPVDVQQKDEWRYWRAILLIEQGQK
QEGENQLRELMTIRGFYPMAAAQKLNVNYPLTIMIAAKPERSIGQLPEVARVRELMFWGL
ESLARSEWAGLVASRDRPQQEALARFAFEQHWYDLSVQATIVAKLWDNLEERFPLAWNDD
FRRATQGKGISQSYAMAIARQESAWNPQAHSAVGAAGLMQLMPATAQHTAEMFNIASYTN
SSQLLDPQMNIQLGTSYLDYVYQSFGQNRILASAAYNAGPSRVSNWLKDSGGRIDAIAFV
ESIPFSETRGYVKNVLAYDVFYRSLMQQRPTTLLMDNEWQRRY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaattagggtattggcgatatgtggccgccgcgctgtgtctcattggggtatcg
tgccaggcgttggcggattctctggatgagcagcggcagcgttatcagcaaataaagtcc
gcgtgggataataaccagatggatgtggtttcccaattaatgccgacgctacgtgattac
ccgctttacccttatctggaataccgggcgctgacgcaggatttatcgacggtcagcgag
gttcaggtcaaacagtttatggcttcgcacccgacactgcctgcggtgcgtacgctcaat
aacagctttatcaatgaactggctcgtcgccaggactggaatggactgctggcgttcagc
ccggaacaacccaagccggtcgcctctctctgcaactatctgtatgccaaaatcatggtg
gggcagccgcaaggcgtctgggagcagacccgtgaaatctggttgaccggtcgttcattg
ccgccgacctgtgacaagctattttcagcctggcagcagcaaggcggattgacgtcgtta
atggttcttgaacggatgcggctggcgatggatgcgggcagcgcaggtctggtgaatcat
ctttccagacaattaccggcagattacaagaccatcaccgatgcgttgctgagattgcaa
agcaatcctaaaacgatcgagcgcttcgcccgctctgtcggcccgacggattttacccgg
agagcggtattatcggcgttcagtcgcattgcccgtcaggatccggatgaggcgcgggcg
ttgctgccgcagctgattcgtctgcagaaaatacgtccgcaggaacgccagagcatggaa
gatgacatcgcctggcgtctgatgggcagcgataccaccgaggagcaggcgctctggcgt
gatgccgtaattctgcgcagcgcctcggcgccgctgctggaacgacgcgtccgtatggcg
ctggggcagggggatcggcccgggctgaagcagtggatggcgcgcttgccggtcgacgtg
cagcaaaaagatgagtggcgctactggcgagcgatattgctgatcgaacaggggcaaaag
caggaaggcgagaaccaactgcgcgaactgatgacgattcgcggtttttacccgatggcc
gccgcgcagaagctcaatgtgaactatccgctgaccattatgattgccgccaaaccggag
cgctcgattgggcagttaccggaagtggcgcgggtacgcgagctgatgttctggggactg
gaaagtctggctcgttccgaatgggcggggctggtggctagccgggatcgtccgcagcag
gaagcgctggcgcgttttgcgttcgaacagcattggtatgacctgagtgttcaggctacg
attgtggcgaaactctgggacaatctggaggaacgcttcccgctggcatggaatgacgat
ttccgccgggcgacgcaaggtaagggcatcagccagagttatgccatggcgattgcccgt
caggaaagcgcctggaacccgcaagcgcattccgccgtgggggcggccggcctgatgcaa
ctgatgccggccaccgcgcagcacactgctgaaatgtttaatatcgccagctataccaac
agcagccagttactggatccgcagatgaatatccagcttggcaccagctatctggattat
gtttatcaatcgttcggccagaaccgcattctggcatccgctgcctacaacgccgggcca
tcgcgggtgagtaactggttgaaagacagcggcggtcggatcgacgccatcgcgtttgtg
gaaagtattccgttttccgagacgcggggatacgtcaaaaatgtactggcctatgacgtt
ttctatcgtagcctaatgcaacagcgcccgactacgttgctgatggacaacgagtggcag
cggcgttactga
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