Dickeya fangzhongdai ND14b: LH89_15860
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Entry
LH89_15860 CDS
T03347
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ced03021
]
LH89_15860
Transcription machinery [BR:
ced03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LH89_15860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Cas3-like_C_2
COG2_N
ASY3-like
Motif
Other DBs
NCBI-ProteinID:
AIR70607
LinkDB
All DBs
Position
complement(3565127..3568030)
Genome browser
AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESDLGLGTVVAMDARMVTLLFPASGENRLYSRNDAPITRVMFNPGDT
ITSHESWQLRVEDVRDENGLRTYIGQRLDIDEPAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRAHRHQLEQALQPWGGLRGMRASLIPHQLHIAREVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMLRRFNLLFSLFDDERYAEARLD
SDNPFETEQLIICSLDFVRRNPSRFEQLLDADWDLLVVDEAHHLVWSEAVPSAGYKAVER
LAHAIPAVLLLTATPEQLGQESHFARLRLLDPNRFHDYHEFIAEQQQYRPVADAVTLLLS
GNSINDSDRNALGDMLGEQDIEPLLKSIASGSDDSAAARQELITMLMDRHGTSRVLFRNT
RQGVKGFPKRELHQIKLPLPTQYQTAIRVSGIMNARKSAEDCARDMLYPEQIYQQFEDDN
ATWWSFDPRVEWMLDFLTSHRDEKVLVICAKAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLIMFDLPFNPDLLEQRIGRLDRIG
QSRDIQILVPYLENTAQALLVRWYHEGLDAFEHTCPTGRSIYDGHYEQLINLLAKPSEQE
GLDEFIHSCRQQHDALKVQLEQGRDRLLEMHSNGGEQAQALAEAIAEQDNDVNLVNFALN
LFDIIGIHQDDRSDNLIVLTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFVSWEH
PLIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKKLQLTRFLPPTPI
RVLLDRKGTNLAAQVEFESFNRQLSSVNRHTSSKLVNAVQDDVHDMLQKAQPLVEAQAQA
LIADAQRNAETQLRREQERLEALKAVNPNIRDDELEALEEQREQVLLNLQQANWRLDAIR
LVVVAHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgatttaggattgggt
acggtagtggcaatggacgcccgcatggttactctgctgtttccggccagtggcgaaaac
cgtctctattcaagaaatgacgcccccattacccgtgtcatgttcaatcccggcgatacc
atcaccagccacgaaagctggcagttacgggtggaggacgtgcgtgacgagaatggcctg
cgcacctacatcggccagcggctggacatcgatgaacccgccgaactgcgggaagtgttc
ctcgacagcaagctgacgttcaataagccgcaggatcggctgttcgccggtcaaatcgac
cgaatggatcgctttgcgctgcgttaccgcgcgcaccgtcaccagctcgaacaggcgttg
cagccgtggggcggactgcgcggcatgcgcgccagcctgattccgcaccagttgcacatc
gcccgcgaagtgggccagcgccatgcgccgcgcgtgctgttggcggacgaagtggggctg
ggcaaaaccattgaagccggcatgattatccaccagcagttgctggcgggccgggcggaa
cgcgtgctgatcgtggtgccggaaacattacagcatcagtggctggtggagatgctgcgc
cgcttcaacctgctgttctcgctgttcgacgacgagcgctacgccgaagcccgccttgac
agcgacaacccgtttgaaaccgagcagttgatcatctgttcgctggattttgtgcgccgc
aacccgtcccgtttcgaacaactgctggacgccgactgggacctgctggtggtggacgaa
gcgcaccatctggtatggagcgaagccgtgcccagcgccggatacaaggcggtcgagcgt
ctggcgcacgccatccccgcggtgctgttgctgaccgcgacgccggaacaattgggtcag
gagagccactttgcccgtctgcggctgctcgatccgaaccgcttccatgactaccacgaa
tttatcgccgaacaacagcaataccgcccggtggccgacgcggtcaccctgctgctgagc
ggcaacagcatcaatgacagcgatcgcaacgcgctcggcgacatgctgggcgagcaggat
atcgaaccgctgctgaagtccatcgccagcggcagcgacgacagcgccgcggcgcgtcag
gaactgatcaccatgctgatggaccgccacggcaccagccgcgtgctgttccgcaacacc
cgtcagggggtgaaaggcttcccgaaacgcgaactgcatcagatcaagctgccgttgccg
acgcagtaccagacggcgatccgcgtgtccggcatcatgaatgcccgcaaatccgctgaa
gactgcgcgcgcgacatgctctatccggagcagatctatcagcaatttgaagacgacaac
gccacctggtggagcttcgatccgcgcgtcgaatggatgctggattttctgaccagccac
cgcgacgagaaggtgctggtgatctgcgccaaggcggccactgcattgcaactggagcag
gtgctgcgcacccgcgaagccatccgcgccgcggtgttccacgaagggctgtcgattctg
gagcgcgaccgcgccgctgcgtacttcgcttccgaagaggaaggagcgcaggtgctgatc
tgttccgagatcggttccgaaggccgcaacttccagttcgccagccacctgatcatgttt
gatctgccctttaacccggatctgctggaacagcgcatcggtcgactggatcgtatcggc
cagagccgcgatatccagattctggtgccctatctggaaaacaccgctcaggcgctgctg
gtacgctggtaccacgaagggctggatgcgttcgaacacacctgtccgaccggtcgttcg
atttacgacggccactacgagcaattaatcaacctgctcgccaaaccgtccgaacaggaa
ggactggacgagttcatccacagttgccgccagcagcacgatgcgctgaaggtccaactg
gaacaaggccgcgaccgcctgctggagatgcattccaacggtggcgaacaggcgcaggcg
ctggccgaagcgatcgccgaacaggataacgacgtcaatctggtgaatttcgccctcaac
ctgttcgacatcatcggtattcatcaggacgaccgcagcgataacctgatcgtgctgacg
ccgtccgatcatatgctggtgcccgatttccccggcctgccgcaggacggttgcaccatc
accttcgatcgcgatcaggcgctgtcccgcgaggacgcgcagttcgtcagttgggaacac
ccgctgatccgcaacggcctggatctgatcctgtccggcgacaccggcagttgcgccgtg
tcgctgctgaaaaacaaggcgctgccggtcggcaccctgctggcggaactggtatacgtg
gtggaagcgcaggcgccgaagaaattgcagctgacccgcttcctgccgccaacgccgatt
cgcgtgctgctggaccgcaaaggcaccaatctggcggcgcaggtggaattcgagagcttc
aaccgccaactgagttcggtcaatcgccacacctccagcaaactggtgaacgcggtgcag
gacgatgtgcatgacatgctgcagaaagcccaaccgctggtggaagcgcaagcgcaagcg
ctgatcgccgacgcgcagcgcaacgccgaaacgcagttgcgccgcgaacaggagcggctg
gaagcgctcaaggcggtcaacccgaacatccgtgacgacgaactggaggcgctggaagaa
cagcgcgaacaggtgctgctcaacctgcagcaggccaactggcgtctggatgccatccgt
ctggtggtggtagcgcaccagtaa
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