Dickeya fangzhongdai ND14b: LH89_15995
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Entry
LH89_15995 CDS
T03347
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00061
Fatty acid biosynthesis
ced00071
Fatty acid degradation
ced01100
Metabolic pathways
ced01212
Fatty acid metabolism
ced02024
Quorum sensing
ced04146
Peroxisome
Module
ced_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LH89_15995
00071 Fatty acid degradation
LH89_15995
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LH89_15995
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH89_15995
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ced01004
]
LH89_15995
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ced04147
]
LH89_15995
Enzymes [BR:
ced01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LH89_15995
Lipid biosynthesis proteins [BR:
ced01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LH89_15995
Exosome [BR:
ced04147
]
Exosomal proteins
Exosomal proteins of breast milk
LH89_15995
Exosomal proteins of breast cancer cells
LH89_15995
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Glyco_transf_21
Motif
Other DBs
NCBI-ProteinID:
AIR70633
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Position
3596670..3598475
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AA seq
601 aa
AA seq
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MKTNSLSHYHLVHRIQQQIAQRPNALAFREWAPEQEQQLDWHQAGERIRRIACGLLGLGV
DVQERVAIFSDNAITWSLADLALLHLRAITVPLYATSAAAQASFILNDADIRTVFVGGQA
QFDLLMSLRDSCPQLRTIILLDEQIRRRGCDIAVSLEEFEAQAELSVWEPVLRQRVADRD
LSDLFTLIYTSGTTGEPKGVMLDYANMATQLVLHDGRLQTSEQDVSLCFLPLSHVFERAW
SFFIMHRGAQNVYLRDTDQVRAAMAAVSPTVMCAVPRFYEKVFSAIHEKVAQAPWHRRTL
FHWGIAQGHKRFLRRQTGKRAGVWNALTYRLADRLVLSRLRQLLGGKVRFLPAAGARLDD
NIIAFFQAMGVRIVYGYGLTETCATVSCWEADHYRLGSVGTPLPGIDVRIGEQNEIQVRG
ATVMRGYYRRPQDTEAAFTPDGWFKTGDVGEVDANGNLFITERLKDLMKTSGGKYIAPQH
LEGALGQDRFIEQVAVIADARKYVSALIVPCFEALEEYARSINLGYQDRLELLRHNHILS
LFEQRLRDVQKEFARFEQVKKFTLLPAPFSQEEGELTPTLKLRRKVIHQRYQLEIEAMYA
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaattcactctcgcactaccatctggttcaccgtattcagcagcaaattgct
cagcgccctaacgcgctggcgtttcgcgaatgggcgcctgaacaggaacagcagctcgac
tggcatcaggcaggcgagcgtattcgccgcatcgcctgcggcctgctggggctgggcgtt
gatgtccaggaacgggtggcgatcttttccgacaacgccatcacctggtcgctggcggat
ctggcgttgctgcacctgcgggcgattaccgtaccgctgtatgccaccagtgcggcggcg
caggcgtcgttcattctgaatgacgcggatatccgtaccgtttttgtcggcggtcaggcg
cagtttgatctgctgatgtcgctgcgcgacagctgtccgcaactgcgcaccattattctg
ctggacgagcagattcgccgtcgcggttgcgacatcgcggtatcgctggaggaatttgaa
gcgcaggcggagttgtcggtgtgggagccggtgctgcggcaacgggtggccgatcgggac
ttgagcgatctgtttacgttgatctatacctccggcaccaccggcgagcccaaaggggtg
atgctggactatgccaatatggcgacccaactggtgctgcatgatgggcggctgcagacg
agcgaacaggacgtatcgctgtgctttttgccgctgtcgcatgtcttcgaacgcgcctgg
agcttcttcatcatgcaccgcggcgcgcagaacgtgtacctgcgcgacaccgatcaggtc
cgtgcggcgatggcggcggtcagccctaccgttatgtgtgcggtgccgcgtttctacgag
aaagtgttcagcgccatccatgagaaagtggcgcaggcgccgtggcaccggcgcacgttg
tttcactgggggatcgcccagggccataaacggtttttacgccggcagaccgggaaacgc
gccggggtgtggaacgcgctgacgtatcgtcttgccgatcggctggtgctgtcgcgtctg
cgccagttgctgggaggaaaggtccgttttctgccggcggcgggtgcgcgtctggatgac
aatatcatcgcctttttccaggcgatgggcgtccgtatcgtttatggttacggcctgacg
gagacctgcgccaccgtgtcctgttgggaagccgaccactaccggctggggtcggtaggg
acgccgctgccgggcatcgatgtgcgcatcggcgaacaaaatgaaatccaggtgcgcggc
gccaccgtgatgcgcggctactatcgccgcccacaggatacggaagccgcctttacgccg
gatggctggtttaaaaccggcgatgtgggcgaggtggacgccaatggcaacctgttcatc
accgaacgccttaaggatctgatgaaaacctcgggcggcaaatacattgcgccgcaacat
ctggaaggcgcgctgggacaggatcgcttcattgaacaggtagcggtgatcgccgacgcc
cgcaagtacgtctccgcgctgatcgtcccttgctttgaggcgctggaggagtacgcccgc
tcgatcaatctggggtatcaggatcgattggagttgttgcgccacaaccatatcctgtcg
ctgtttgaacagcggttgcgcgatgtgcaaaaggagttcgcgcgttttgaacaggtgaag
aaattcaccctgctgccagcgccgtttagtcaggaagagggcgaactgaccccgacatta
aaactccgccgcaaggtcattcatcagcgttatcagctggaaatcgaagccatgtacgcc
gactag
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