Dickeya fangzhongdai ND14b: LH89_16060
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Entry
LH89_16060 CDS
T03347
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00470
D-Amino acid metabolism
ced00550
Peptidoglycan biosynthesis
ced01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LH89_16060 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LH89_16060 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ced01011
]
LH89_16060 (murD)
Enzymes [BR:
ced01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LH89_16060 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ced01011
]
Precursor biosynthesis
Amino acid ligase
LH89_16060 (murD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AIR70645
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Position
3611412..3612725
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AA seq
437 aa
AA seq
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MDYQGRKVVIIGLGLTGLSCVDFFLARGVVPRVVDTRISPPGLDKLPESVERHLGSLNDE
WLLSADLIVASPGIALATPILCEAAEASIEIIGDIELFCREAQAPIVAITGSNGKSTVTT
LVGEMARAAGWAVGVGGNIGVPALELLKQESQLYVLELSSFQLETTYSLHAAAATILNVT
EDHTNRYPLGLQQYRAAKLRIYENAKVCIVNADDALTMPVRGADARCLSFGVDVGDYHLN
RQQGETWLRVKGERVLNTREIKLVGQHNYTNALAALALADAVGIPRSSALIALTTFTGLP
HRFQLVLARHDVRWVNDSKATNVGSTEAALSGLHVDGTLHLLLGGDGKSADFSPLLHYLQ
GDRIRLYCFGRDGGQLAALRPEIAEQTETMEQAMRLIAGRTQPGDMVLLSPACASLDQFR
SFEQRGDEFARLAEELG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggactatcagggtagaaaggttgtcattatcgggttagggctgacagggctctcctgt
gttgattttttccttgcacgcggggtggtgccgcgcgtggtggatacccgtattagtccg
ccgggcctggataaactgcctgagtccgttgaacgccatctgggcagcctcaatgatgag
tggctgctgtccgccgatctgatcgtcgccagtccgggtatcgcgttggcgacgccgatc
ctgtgcgaggcggcagaagccagcattgaaattatcggcgatatcgaactgttctgccgc
gaagcgcaggcgccgatcgtcgctatcaccggttccaatggtaaaagcaccgttaccacg
ctggtgggtgaaatggcgcgtgcggccggttgggccgtcggcgtaggcggcaacatcggc
gtaccggcgctggagctgctcaagcaggaaagccagctgtatgtgctggagctgtcgagc
ttccagttggaaaccacttacagcctgcacgccgccgcagccacgatcctcaacgtcacc
gaggatcacaccaaccgctacccgctggggctgcagcagtaccgcgccgccaaattacgc
atttatgaaaacgctaaagtctgcattgtgaacgcggacgacgccctgaccatgccggtg
cgcggcgccgacgcgcgttgcctgagtttcggcgtggatgtgggcgattaccacctgaac
cggcagcagggtgaaacctggctgcgggtgaaaggcgagcgggtgctgaatacccgcgaa
atcaaactggtcggtcagcacaactacaccaatgcgctggctgcgctggcgctggcggac
gctgtgggcattccccgctcgtcggccctgatcgcgctgactacctttaccggcctgccg
caccgtttccaactggtgctggcgcgtcatgacgtgcgctgggtcaatgattccaaggct
accaatgtcggcagcaccgaggcggcgctgagcgggctgcatgtcgatggcacgctgcat
ctgttgctgggcggcgacggaaaatcggcggatttctctccgttattgcattacctgcag
ggcgaccgcattcgtttgtactgctttggccgtgatggcgggcaactggcggcgctgcgt
ccggaaatcgccgagcagaccgaaactatggagcaggcgatgcgtcttatcgccggccgc
acccagccgggtgacatggtgttgctgtcgccggcttgcgccagtctcgatcagttccgc
agtttcgaacagcgcggcgacgagttcgcccgcctggcggaggaactgggataa
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