Dickeya fangzhongdai ND14b: LH89_16900
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Entry
LH89_16900 CDS
T03347
Symbol
cpdB
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00230
Purine metabolism
ced00240
Pyrimidine metabolism
ced01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
LH89_16900 (cpdB)
00240 Pyrimidine metabolism
LH89_16900 (cpdB)
Enzymes [BR:
ced01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
LH89_16900 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
LH89_16900 (cpdB)
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Motif
Pfam:
5_nucleotid_C
Metallophos
PTase_Orf2
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
AIR70809
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All DBs
Position
complement(3804774..3806723)
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AA seq
649 aa
AA seq
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MKHKLVLSLLAIAIANATQAATVDLRVLETTDLHSNMMDYDYYKDSPTDKFGLVRTASLI
QAARQQAVNSVLVDNGDIIQGSPLGDYAAAKGLKKGDVHPVYLAMNTLDYAVGNIGNHEF
NYGLDYLHNALAGAHFPYINANVLDAKTGKPLFTPYLIEKKTVKDRDGTSHELRIGYIGF
VPPQIMVWDKANLSGKVTVADITETAKKWVPELRKQGADVVIAIPHSGLSAEPYKTMAEN
SVYYLSQIPGIDAIMFGHAHAVFPSKDFVSIKGADIAKGTLNGVPAVMPGQWGDHLGVVD
LVLNNDSGQWKVTEGKAEARPIYDKAQKKSLAAEDPQLVNVLSDAHEKTREFVSKPIGKA
SDNMYSYLSLIQDDPTVQIVNNAQTAYVEHFIQGDPDLAELPVLSAAAPFKAGGRKNDPA
SYVEVEKGQLTFRNAADLYLYPNTLVVVKVKGEQVREWLECSAGQFNQIDAHKREPQSLI
NWEGFRTYNFDVIDGVNYQIDVTQPARYDGECQLLNGNAHRIKDLTFKGKPIDPQATFLI
ATNNYRAYGEKFAGTGEKQVAFASPDENRAVLAAYISAETKKAGEVKPAADNNWRLAKIV
SDTPLDIRVETSPSPKAAAFIKEKSQYPLTLVGNDDIGFAVYRLDLQKQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaagcataagctggtgctgagcctgctcgcgatagccatcgctaacgccactcaggca
gccaccgtcgatttacgggtgctggaaaccaccgatcttcacagcaatatgatggactat
gactactataaagacagtccaacggataaattcggactggtccgtaccgccagcctgatt
caggccgcccggcagcaagccgtcaacagcgtgctggtagacaacggcgacattattcag
ggcagcccgctgggcgactacgccgccgccaaagggttgaagaaaggcgacgtgcacccg
gtctatctggcgatgaacacgctggattatgcggtcggcaatatcggtaaccacgaattc
aactacgggctggactacctgcacaacgcgctggccggcgcccatttcccgtatatcaac
gccaacgtgctggacgcgaaaaccggcaaaccgctgtttaccccttacctgatcgaaaag
aaaacggtgaaagaccgcgacggcacatcccacgagctgcgcattggttatatcggcttc
gtgccgccgcaaatcatggtgtgggacaaagctaacctgagcggcaaagttacggtagcg
gacattaccgaaaccgcgaaaaaatgggtgccggaactgcgcaagcagggggcggacgtg
gtgattgccataccgcattccggcctgtcggcggagccgtacaaaacgatggcggaaaac
tcggtctactacttaagccaaatccccggtattgacgccattatgttcggccacgcccac
gcggtattcccgagcaaggatttcgtcagcatcaaaggcgctgatatcgcaaaaggcacg
ctgaacggcgttcccgccgtgatgcccggccagtggggcgaccatctcggcgtggtggat
ctggtactgaacaacgacagcggccagtggaaagtgaccgaaggcaaagcggaagcccgc
ccgatctacgacaaagcccagaagaaatcgctggcggcggaagacccgcaactggtcaac
gtgctgtcggacgcccatgagaaaacccgcgagttcgtcagtaagccgatcggcaaagct
tccgacaatatgtatagctatctgtcgctgattcaggacgacccgacggtgcagatcgtc
aacaacgcgcagacagcgtacgtcgagcactttattcagggcgacccggatttggcggaa
ctgccggtgctatcggcagcggcgccgttcaaagcgggcggccgcaagaacgacccggcc
agctacgtggaagtggaaaaaggccagttgaccttccgtaacgccgccgacctctatctc
taccccaacacgctggtggtggtaaaagttaaaggcgagcaggtacgggaatggctggaa
tgctccgccggtcagttcaaccagattgacgcgcacaaacgcgagccgcagtcgctcatc
aactgggaaggctttcgcacctacaactttgacgttattgacggcgtgaactatcagatc
gacgtcacccagcccgcccgctacgacggcgagtgccagctgctcaatggcaatgcgcat
cgcatcaaggatctgaccttcaaaggcaaacccatcgatccgcaggccacgttcctgatc
gccaccaacaactaccgcgcctacggcgagaaattcgccggcaccggcgaaaaacaggtc
gcgttcgcctcgccggatgaaaaccgtgcggtgctggccgcctatatcagcgccgaaaca
aaaaaagccggcgaggtaaaaccggccgcggacaacaactggcgtctggcaaaaattgtc
agcgataccccgctggatatccgggtggaaacatcgccgtcgccgaaagcggcagccttc
attaaggaaaaatcgcagtacccgctaacgctggtaggtaacgacgacatcggctttgcc
gtctaccgtctggacctgcaaaaacagtaa
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