Dickeya fangzhongdai ND14b: LH89_17065
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Entry
LH89_17065 CDS
T03347
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ced03009
]
LH89_17065 (rumA)
Enzymes [BR:
ced01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LH89_17065 (rumA)
Ribosome biogenesis [BR:
ced03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LH89_17065 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
Methyltr_RsmB-F
MTS
RrnaAD
Cons_hypoth95
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_ANTKMT
Methyltransf_23
Ubie_methyltran
Methyltransf_15
PabTrmU54_TRAM_dom
FtsJ
Motif
Other DBs
NCBI-ProteinID:
AIR70841
LinkDB
All DBs
Position
3848754..3850088
Genome browser
AA seq
444 aa
AA seq
DB search
MAQFYSPNRRVTTRQTLTVTANDLDPFGQGVARHQGKTLFIPGVLPGEQAEVQLTEEKRQ
FAHARLRRLLTTSEERVTPRCPHFSVCGGCQQQHASQPLQHRSKAAALTHLMTRETGAVP
PEPEMIAGSAYAYRRRARLALYYQAKTRRLQMGYRQAGSHDLVDIGACPILRPELEALLA
PLRDCLGQLQAVRRLGHVELVLAEQGPLVILRHLDPLRDADRQALTAFAVQHGAALFAAP
EAGALECLHGDMPSYRIAGLSLAFSPRDFIQVNDDINQRMVERALTWLDPQPQDRVLDLF
CGMGNFTLPLAARAGSVVGVEGVAALVDKGRENAQRNGLTQVTFYHHDLEEDVTRQPWAS
MGFDKILLDPARAGAPGVMPQIVKLAPRRVVYISCNPTTLARDSKVLMAAGYRLARLAML
DMFPHTGHLESMALFLLGSDGSVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctccaaaccggcgcgtgacgacccggcaaacccttaccgtgacg
gcgaatgatctggatccattcggacagggagtagcccgccatcagggaaaaacgctgttc
atccccggcgtgctgccgggtgagcaggccgaggtgcagttgacggaagagaaacgccag
tttgcccatgcccggctgcggcggttgttaaccaccagcgaagagcgcgtgacgccgcgc
tgcccgcacttttccgtttgcggcggttgccagcagcagcatgccagccagccgttgcag
caccgcagcaaggcggccgcgctgacacacctgatgacgcgggaaaccggcgccgtcccg
ccggagccggaaatgatcgccggatcggcctatgcctaccgccgccgcgcgcgccttgca
ttatactatcaggcgaaaacgcgccggttacagatgggctaccggcaggcgggatcgcac
gatttggtggatatcggcgcctgcccgattttgcggccggaactggaagcgctgctggcg
ccgttgcgcgattgtctcgggcaattgcaggccgtccggcggctcggacatgtggagctg
gtgctggccgagcaggggccgctggtgatcttgcgccatctggatccgttacgtgacgct
gaccgtcaggcgctgacggcgttcgccgttcagcatggcgcggcgctgtttgcggcgccg
gaagccggtgcgctggaatgcctgcacggcgacatgccgtcttatcgcatcgccgggtta
tcgctggcgttcagcccgcgggatttcattcaggtcaatgacgacatcaaccagcgtatg
gtggagcgggcgttgacctggctggatccgcagccgcaggaccgggtgctcgacctgttt
tgcggtatgggcaattttaccctgccgctggctgcgcgcgccggcagcgtggtcggggtc
gaaggcgtggcggcgctggtggacaaagggcgggagaacgcccagcgcaacgggctgacg
caggtcacattttatcatcatgacctggaagaggacgtcacccggcaaccgtgggcgtcg
atgggatttgataagatactgctcgacccggcccgcgccggcgcgccgggcgtgatgccg
cagattgtgaaactggctccccggcgggtggtgtatatatcctgtaatcccaccacgctg
gcgcgggacagcaaagtgctgatggccgccggttatcgtctggcccggctggccatgctg
gatatgtttccacataccggacatcttgagtcgatggcactgtttttgcttggttccgat
ggctcggtaaagtag
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