Dickeya fangzhongdai ND14b: LH89_18025
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Entry
LH89_18025 CDS
T03347
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced03030
DNA replication
ced03430
Mismatch repair
ced03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH89_18025
03430 Mismatch repair
LH89_18025
03440 Homologous recombination
LH89_18025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ced03032
]
LH89_18025
03400 DNA repair and recombination proteins [BR:
ced03400
]
LH89_18025
Enzymes [BR:
ced01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH89_18025
DNA replication proteins [BR:
ced03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH89_18025
DNA repair and recombination proteins [BR:
ced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH89_18025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
AIR71011
LinkDB
All DBs
Position
4048584..4049318
Genome browser
AA seq
244 aa
AA seq
DB search
MSTVITRQIVLDTETTGMNKLGVHYEGHKIIEIGAVEVVNRRLTGRHFHVYLKPDRLVDP
EAYNVHGISDEFLADKPTYGDVVDDFLDFIRGAELVIHNAAFDIGFMDYEFRLLKRDIPK
TETFCTITDSLLMARRLFPGKRNNLDALCDRYQIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSLAFSMEGDTQQQAAQAETIQRISRPASALAVLYASDEELVAHEQRLDLIMKKGGSC
LWRN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgtaattacacgacaaatcgttcttgatactgaaaccaccggtatgaataaa
ctgggggttcactatgaagggcacaagattattgagatcggtgcggtcgaggtggtgaac
cgtcgtctgaccgggcgccacttccatgtctacctcaaaccggaccggttggtggacccg
gaagcctataacgttcatggcatcagtgatgaatttctggcggataagccgacttacggc
gatgtcgtcgatgattttctcgatttcatccgcggcgccgagctggtgatccataacgcg
gcgttcgatatcggctttatggactatgagtttcgcttactgaagcgcgatatcccgaaa
accgagacgttctgcaccatcaccgacagcctgctgatggcgcgccggttatttcccggc
aaacgtaataacctggatgcgttgtgcgatcgttaccagatagataacagtaagcgtacg
ctgcacggcgcgttactcgatgccgaaattctggccgaagtttatctggcgatgaccggc
ggtcaaacgtcgctggccttttcgatggagggcgatacccagcagcaggcggcgcaagcg
gaaaccatccagcgcatttcacgcccggcatcggctctggcggtattgtatgccagtgac
gaagaactggtggcgcatgagcaacgtctggatttgattatgaaaaaaggcggcagttgc
ctgtggcgtaactga
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