Dickeya fangzhongdai ND14b: LH89_18280
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Entry
LH89_18280 CDS
T03347
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH89_18280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ced03400
]
LH89_18280
Enzymes [BR:
ced01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LH89_18280
DNA repair and recombination proteins [BR:
ced03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH89_18280
Prokaryotic type
LH89_18280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIR71055
LinkDB
All DBs
Position
complement(4096905..4097591)
Genome browser
AA seq
228 aa
AA seq
DB search
MTTSLTWHDVLAQEKELPYFVNTLSFVHQERTAGKVIYPPQKDVFNAFRFTEFHDVKVVI
LGQDPYHGPNQAHGLSFSVRPGVPAPPSLVNIYKELANDIPGFEIPTHGFLQSWAQQGVM
LLNTVLTVEAGKAHSHANLGWETFTDKVIEKLNAHREGIVFLLWGSHAQRKGSIIDTQRH
HVLKAPHPSPLSAHRGFLGCHHFSRTNQLLEQQGDSPIDWTPRLPENS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttccctgacctggcacgacgtgctggcccaagagaaagaactaccctatttc
gtcaatacgttgtcgttcgttcatcaggaacgtacagctggcaaggtgatctacccgccg
cagaaagacgtcttcaacgcctttcgttttactgaattccacgatgtcaaagtggtgatc
ctggggcaggacccgtatcacggcccgaatcaggcgcatggactgtcgttttcggttcgc
ccaggcgtgccggcaccgccgtcgctggtcaatatctacaaagagctggctaacgatatc
cccggatttgaaattccgacccacggctttttgcagagctgggcgcagcagggcgtgatg
ttgctcaataccgtgctaacggtggaagcaggcaaagcacattcgcacgccaatctgggc
tgggaaaccttcaccgacaaggtgatcgaaaagctgaacgcgcaccgggaagggattgta
ttcctgctgtggggatcgcacgcgcaaagaaagggcagcattattgatacacagcggcat
catgtgttgaaggcgccgcatccctcgccgttatctgcccaccgcggttttttagggtgc
caccatttctccagaaccaatcagttgctggaacaacagggcgattcgccgatcgactgg
acaccccgcttgccggaaaattcataa
DBGET
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