Dickeya fangzhongdai ND14b: LH89_18385
Help
Entry
LH89_18385 CDS
T03347
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LH89_18385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_18385
02044 Secretion system [BR:
ced02044
]
LH89_18385
Transporters [BR:
ced02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LH89_18385
Secretion system [BR:
ced02044
]
Type I secretion system
Adhesin protein transporter
LH89_18385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
DUF87
ATP-synt_ab
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AIR71075
LinkDB
All DBs
Position
complement(4116900..4119086)
Genome browser
AA seq
728 aa
AA seq
DB search
MNTHHEQPPGGEEYHHSPQHQDPRIRHDDPLLDSLLVLCRLQGKPTSRATLTAGLPLEDL
RLPANLLPRAAARAGLRARILKRSLNAIPAMSLPAMLLLREGRAAILLGWTADGSARLMT
GETEGGEITVDHNTLQQNYLGLVMFAQSAHRFEASPTALLPRSKAWFRDTLKLSRSLHLD
AVVASLLINIIALFVPLFVMQVYDRVIPNQTTTTLWVLASGVGIALLFDLVLRILRSICV
DIAGKKTDLILSAALFERLTGMMLSAFPARTGAVAHRVREFQALRDTLSSLTLGTLIDFP
FTLLMLILLGMLGGPLVWIPLLTLPLVLLINGLLQQPISAALAHSRRLTDERQALLTETL
SGLDAIKINNAEGERQRQWEQISGDISRLDSRVKTLSAIATHLTQSCQHLAGIVVIVSGV
YLLLDSQLTLGTLFACYLLNSRALMTLGPLSELFTRYQQARLTLEETRRLMELPQERGEQ
PYPLKRESIQGSIEFRDVTFRYPEQKNRALIDINLSIRPGEKVGIIGRTGSGKSSLEKLI
ANLYQPTNGNLLIDGVDARQLDIADVRHHIGYVPQDIQLFSGTLRDNLICGARYVEDDAM
LRVADIAGVNDFARLHPDGYNLQVGERGMQLSGGQRQAVAIARALLLDPPILVMDEPTSA
MDNSSEDRFKQALQTCLANKTLLLVTHRVSMLTLVDRLVIVDKGRIIADGPKAIVLDALK
KGQINASR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacaccatgagcagccaccgggcggcgaggaatatcatcattccccgcaacat
caggatccccgcatccgccacgatgaccctttgcttgacagcctgttggtcctgtgtcga
ttgcagggaaagccgaccagccgcgctacgctgaccgcggggttaccgcttgaagacctg
cgtttgcccgccaatttgttgccgcgcgccgcagctcgcgccggtttgcgggctcggata
ctcaaacgctcactgaacgccattccggcgatgtcgctgcccgctatgctgttactgcgc
gaagggcgcgccgccatcctgttgggctggacggcagacggcagcgcccgcctgatgacg
ggtgaaaccgaaggcggcgaaattacggtcgaccacaataccttgcagcaaaactatctg
gggctggtgatgttcgcccagtccgctcatcgctttgaagcctctccgacagccctgctg
ccgcgaagcaaggcctggttccgggacacgctgaagctatcgcgcagtctgcatctggat
gccgtggtcgccagcctgctgattaatatcatcgcgctgtttgtcccgttgttcgtcatg
caggtctacgatcgggtaatccccaatcaaaccacaaccaccttgtgggtgctggcctcc
ggcgtcggcattgccctgctctttgaccttgtcctgcggatattacgcagcatttgcgtc
gatatcgccgggaaaaagaccgaccttatcctttccgccgccttgtttgaacgcctgacc
ggcatgatgctgtcggcctttccggcacggaccggcgcggtggcgcaccgggtacgggaa
tttcaggccttgcgcgatacgttatcgtcgctgacgttgggaacgctgatcgactttccg
ttcacgctgctgatgctgattctgctcggcatgctgggtggtccgctggtctggataccg
ttgctgacgctgccgctggtcctgctgatcaacgggctgttgcaacagccgatctcggcg
gcgctggcccattcccggcgtctgactgacgaacggcaagcgctgctgaccgaaacgctg
agcgggttggatgccatcaaaattaataatgcggaaggcgaacgccagcgccagtgggaa
caaatcagcggcgacatcagccggctagactcgcgggtgaaaacattatcggccatcgcc
acccatctgacgcaatcgtgccagcatctcgccggcatagtagtgattgtctcaggggta
tatctgctgctggacagccaactaaccctgggcacgctgttcgcctgttacctgctaaac
agccgggcgctgatgacgctggggccgctgtccgagctgtttacccgttatcagcaggcg
cggctgacgctggaggaaacccggcggctgatggaattaccgcaggagcggggcgaacag
ccctaccctctgaaacgggaaagcattcagggcagcattgagtttcgtgatgtcaccttc
cgttatccggaacagaagaatcgcgccctgattgatatcaacctgtcgatccgtcccggc
gaaaaagtcggcattatcggccgtaccggctccggtaaaagctctctggaaaagctgatc
gccaacctttatcaaccgaccaacggcaacctgctgatcgacggcgtggacgcccgtcag
ctcgatatcgccgatgtgcgtcaccacatcggctatgtgccgcaggatattcaactgttc
agcggtacgctgcgggacaacctgatttgcggcgcccgctatgtagaagacgacgcgatg
ctgcgcgtggcggatatcgccggcgtaaatgatttcgcccggttgcacccggacggttat
aacctgcaggttggcgaacggggtatgcaactgtcgggtggtcagcggcaggcggtagct
attgcgcgcgcgctgttgcttgatccgccgattctggtgatggacgagcctaccagcgcg
atggacaacagcagcgaagaccggtttaagcaggctctgcaaacctgtctcgccaacaag
acgctgctgctggtgacgcaccgcgtttccatgttgacgctggtcgatcggctggtgatc
gtggacaaagggcgcattatcgccgatggtcccaaagccattgtgctggatgcattaaag
aaggggcagatcaatgcgtctcgctaa
DBGET
integrated database retrieval system
