Dickeya fangzhongdai ND14b: LH89_18860
Help
Entry
LH89_18860 CDS
T03347
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_18860
Transporters [BR:
ced02000
]
Other transporters
Pores ion channels [TC:
1
]
LH89_18860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DEC-1_N
Pilus_CpaD
DUF3187
Opacity
Motif
Other DBs
NCBI-ProteinID:
AIR71163
LinkDB
All DBs
Position
complement(4228493..4229557)
Genome browser
AA seq
354 aa
AA seq
DB search
MKKTAIAIAVALAGFATVAQAAPNDNTWYAGGKLGWSQYHDTGLTGNGYNVTNAAQSQLG
AGAFGGYQANPYLGFEMGYDWLGRMKYNGGNQGSFKAQGVQLAAKLSYPIVDDLDIYTRL
GGFVWRADSHDNSGLNDHDTGVSPLAAVGVEYAITKNWATRLDYQWVNNIGDASTVGGRP
DNGLLSVGVSYRFGQETAAPAPVIAPAPAPTPAPAPVVQTKRFTLKSDVLFNFNKATLKP
EGQRSLDQLYSQLSTLDPKDGSVVVLGFTDRLGSDQYNQTLSTKRAQTVVDYLVHKGIPA
NKISARGMGKANPVSGSTCTSVKARAALIDCLAPDRRVEIEVKGIKDVVTQPQA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacagctatcgcgattgcagtggcactggctggctttgctaccgtagcacaa
gccgcaccgaacgataacacctggtacgcgggtggtaaactgggttggtcccagtaccac
gataccggcctgaccggcaatggttacaacgtgaccaacgctgcgcagagccaactgggt
gcaggcgcattcggcggttatcaggctaacccgtacctgggttttgaaatgggctacgac
tggctgggccgtatgaagtataacggcggcaaccagggcagcttcaaagctcagggcgtt
cagctggcagctaaactgagctacccgatcgttgacgatctggacatctacacccgtctg
ggtggttttgtatggcgtgcagacagccacgacaactccggcctgaacgaccacgacact
ggcgtttctccgctggcagctgtgggtgttgaatacgctatcaccaaaaactgggcaacc
cgtctggactaccagtgggtgaacaacatcggcgacgcctccaccgttggcggtcgtccg
gacaatggcctgctgagcgtgggcgtttcttaccgtttcggtcaggaaactgctgctccg
gctccggttattgctccagctccggccccgactccggctccggccccggttgttcagacc
aagcgtttcactctgaagtctgacgtactgttcaacttcaacaaagcgactctgaaaccg
gaaggtcagcgctctctggaccagctgtactctcagctgagcactctggatccgaaagac
ggttccgtagtggttctgggcttcaccgaccgtctgggttccgaccagtacaaccagact
ctgtccaccaaacgtgcacagaccgttgttgattacctggttcacaaaggtatcccggct
aacaagatctctgctcgcggtatgggtaaagctaacccggttagcggttctacctgcact
agcgtgaaagctcgcgctgcactgatcgattgcctggcaccggatcgtcgcgtagagatc
gaagtgaaaggcatcaaagacgtagtaactcagcctcaggcttaa
DBGET
integrated database retrieval system
