Dickeya fangzhongdai ND14b: LH89_21235
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Entry
LH89_21235 CDS
T03347
Name
(GenBank) diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LH89_21235
Enzymes [BR:
ced01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LH89_21235
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Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
CSS_CxxC
YagK_YfjJ_C
Motif
Other DBs
NCBI-ProteinID:
AIR71611
LinkDB
All DBs
Position
complement(4747944..4749449)
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AA seq
501 aa
AA seq
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MNKLIAFLTFLAMFAVGLCAIYYQDYRAERKSAYANAERAVRNIEEILNEAKDAVEDSKP
LLAQSCTPDVIRQLNMTAAIASHLRTVSLIKNDVVYCSSLYGVDNRPAALGRFHMRELAL
LAGNSVTPDRTLIMYLGTTADGSIGVAIHGQHLTNVLDLLSKRRELYLLVGNTWISRDNK
VSAFNPEDLRNFIVIPSSHYHFFILFPRDDKYPLADFWNQEKMTLLVVFLIALSSGFLAY
KYSTRFNSPYDGIRRAIENQEVLPYYQPVIATESQEIYGVEVLARWHHPKSGFISPDIFI
PLCEQSGLIIPMTRSLMSSVVRDLTSRLDTLPDNLHIGINISAQHCQSDDFITDCQNFIA
AFGEKKVHLMIEITEREKIEITPETIAFFKRLSDAGVLIALDDFGTGYSNFDYLRKLHVN
VIKIDQSFVSMIDENDPQSSTLVNCVIDLAQQMNLKTVAEGVETEYQAAFLSRKQINFMQ
GYFFSRPLPFDELAQTWLSKR
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactaatcgctttcttgacctttttagcgatgttcgccgtaggcttatgtgct
atttactaccaggactatcgtgctgagcgtaagagcgcttacgccaatgcggaaagagca
gttagaaatatcgaggaaattctcaacgaagccaaagatgcggtggaagacagtaaaccg
ctattggctcaatcctgcacgcctgacgtcatccgacagttgaatatgacggcggcgatc
gccagccatctgcgtaccgtcagcctgataaaaaatgatgtggtgtactgctcgtcgctg
tatggcgtagataatcgcccggcggcgctgggacgctttcatatgcgggaactggcgctg
ctggccggtaactccgtcacgccggacaggaccctgattatgtatctcggcaccacggcg
gacggtagcattggcgtagcgatacatggtcagcatttaaccaacgtgctggatctgctc
agcaagcgacgggagctttatttactggtcggcaatacctggatatcacgtgacaataag
gtgtcggcgtttaatcccgaagatttgcgcaatttcatcgttatcccttccagccattac
cattttttcattctttttcctcgcgacgataaatacccgctggccgacttttggaatcag
gaaaaaatgacgttgctggtggtattcctgattgccctcagctccggctttctggcttat
aagtattcgacacgtttcaactcgccttatgacggcattcggcgcgccatcgaaaatcag
gaagtgttgccctattaccagccggttatcgccaccgagtcacaggaaatttacggtgtg
gaagtgctggcgcgctggcatcatccgaagagcggttttatttcccccgatatttttatt
ccgctgtgtgaacaaagcggtctgattatcccgatgacccgctcgttaatgagcagcgtg
gtgcgcgatttgacatctcgtctggacaccctgccggacaatttgcatattggcatcaat
atcagcgcccaacactgccagtccgacgattttattaccgactgccagaacttcatcgcc
gcttttggcgagaaaaaagtgcatctgatgattgaaattaccgagcgggaaaaaatcgaa
attacgccggagactatcgccttcttcaaaagactaagcgatgccggcgtgctgatcgcg
ctggacgatttcggcaccggctattccaattttgactatctcagaaaactgcacgtgaac
gtcatcaagatcgaccagtcgtttgtcagcatgatcgacgagaacgatccgcaatccagc
acgctggtgaactgcgttatcgacctggcgcaacagatgaacctgaagacggtcgccgaa
ggggtggaaaccgaatatcaggccgcgtttttgtcccgcaaacagatcaatttcatgcag
gggtatttcttctcccgaccgctgccgtttgacgaactggcgcaaacctggctcagcaaa
cgctga
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