Dickeya fangzhongdai ND14b: LH89_21335
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Entry
LH89_21335 CDS
T03347
Name
(GenBank) porin
KO
K09476
outer membrane pore protein F
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced01501
beta-Lactam resistance
ced02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LH89_21335
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LH89_21335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_21335
01504 Antimicrobial resistance genes [BR:
ced01504
]
LH89_21335
Transporters [BR:
ced02000
]
Other transporters
Pores ion channels [TC:
1
]
LH89_21335
Antimicrobial resistance genes [BR:
ced01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
LH89_21335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
AIR71631
LinkDB
All DBs
Position
complement(4772164..4773264)
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AA seq
366 aa
AA seq
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MMKRNVLAVVIPALLAAGAANAAEVYNKDGNKLDLTGKIVGDHYFSKDDNNEGDQTYARL
GFTGETKINSDLTGYGRFEYQFNAARAEDTNASNGSKTRYAYAGLKFGDFGSIDYGRNRS
VAYDGISYTDVLPEFGGDQAYTDNLTGRNSGVATYRNKNFFGLVDGWDFALGYQSAHNDS
NRVQKKTGAGWAVSSSYTAPFGVGVTGSYTQANRTETQIADGRGDKAEAWATGLKYDANN
VYVAATYGEYRNLTYITNSTFDNSTADTIRGNNAFDKTKVFEAVAQYNFDFGLTPSIGYV
TAKGEDNTSVARTDDYITKYVSLGLTYAFNKNFSTYTEYDINLLDKDNAYGLSTNDIVAV
GVVYQF
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgcaatgttcttgcagtggtaattcctgctctgctggctgccggcgcagct
aacgcggccgaagtgtataacaaagatggtaacaaattggatctgaccggtaagattgtc
ggtgatcactacttctccaaagacgacaataacgaaggcgatcagacctatgctcgtctg
ggttttactggcgaaaccaaaatcaacagcgatctgactggttatggccgctttgaatat
cagttcaacgcagcacgcgctgaagataccaatgcatccaacggcagcaaaacccgttat
gcttatgccggtctgaaattcggtgacttcggctccatcgattatggtcgcaaccgcagc
gttgcatatgatggtatttcttataccgacgtactgccggaattcggcggcgatcaggct
tataccgataacctgactggccgtaactcaggtgttgccacttaccgcaataaaaacttc
ttcggtctggttgatggctgggatttcgctcttggctaccagtctgcccataacgactca
aacagagtgcagaaaaaaaccggcgccggttgggctgtttcttctagctatacagcaccg
tttggcgttggtgttaccggttcatatactcaggccaatcgtaccgaaacccaaattgcc
gatggccgtggcgataaagccgaagcgtgggcaaccggtctgaaatatgacgcgaataac
gtctatgttgctgccacctatggtgaataccgcaacctgacctatattactaacagcacg
tttgacaacagcacagcagacacaattcgcggcaacaatgcttttgataagacaaaagtc
tttgaggccgttgctcagtacaactttgacttcggcctgacaccgagtattggttatgtc
acggctaaaggtgaagacaacacctctgttgcccgtactgatgattacattaccaaatac
gttagcctgggtctgacttacgcattcaacaagaacttctctacctacaccgagtacgat
atcaacctgctggacaaagacaacgcctatggcctgtccactaatgacatcgttgctgtt
ggtgtagtttatcagttctaa
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