Dickeya fangzhongdai ND14b: LH89_21490
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Entry
LH89_21490 CDS
T03347
Name
(GenBank) peptidoglycan-binding protein
KO
K19236
L,D-transpeptidase YcfS
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
LH89_21490
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ced01002
]
LH89_21490
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ced01011
]
LH89_21490
Peptidases and inhibitors [BR:
ced01002
]
Cysteine peptidases
Family C82
LH89_21490
Peptidoglycan biosynthesis and degradation proteins [BR:
ced01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LH89_21490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
Motif
Other DBs
NCBI-ProteinID:
AIR71661
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Position
4813399..4814397
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AA seq
332 aa
AA seq
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MKRALTLMGLLFTSCLAGMQPASATEYPLPPPDSRLIGENITYTVSNDGHPLETIASKFK
IGLLGMLEANPGTDPYLPKPGSSLTIPLQMLLPDTPREGVVVNLAELRLYYFPKGKNTVI
VYPIGIGQLGRNTPVMVTRVIERRPNPTWIPTANIRRHYKEQGITLPAVVPGGPDNPMGL
FALRLEKSGGVYSIHGTNADFGIGMRVSSGCIRLRPEDIEALFNDVPVGTRVQIINEPIK
IAVEPDGKRYVEVHQPLSRTDKDDPQTMPIALSQKVKAFIHNDDTDAEAAQDAIVRRSGM
PVLVNAGQSVPHQPLLQQQGAPISAVVTSPSH
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgcgcttaccctgatgggattattgtttacctcctgtctggcgggcatgcag
cctgccagtgcgacggaatatcctctgccaccccctgacagtcgcctgatcggggaaaat
attacctataccgtgtccaatgacgggcatccgctggaaaccatcgcttccaaattcaaa
atcggcctgctcggtatgctggaagccaaccccggcaccgacccctacctgcctaagcca
ggctccagcctgacgattccgttgcagatgttgctgccggatacgccgcgggaaggggtg
gtggtcaatctggcggaactgcggctgtactatttcccgaaagggaaaaatacggtgatc
gtctatccgatcggcattggccagcttggccgcaatacgccggtgatggtaacccgcgtt
atcgagcgacgtccgaatccgacctggatccctaccgccaacattcgtcgtcactataaa
gagcaggggattacgctgccggcggtagtacccggcgggccggacaacccgatggggctg
ttcgcgttacggctggagaaaagcggcggcgtgtactcgattcatggcacgaatgccgat
ttcggcatcggtatgcgggtgagttccggttgtatccgtttgcgtccggaagatattgaa
gcgttgtttaatgacgtgccggtaggcacccgggtacagatcatcaatgaaccgatcaag
attgcggtggaacctgacgggaaacgctatgtggaagtgcatcagccgctgtcgcgcacc
gataaggatgacccgcagaccatgccgattgcgctgagccagaaggtgaaagcctttatc
cacaatgacgataccgatgccgaagcggctcaggacgcgattgtgcgccgttccggtatg
ccggtgctggtcaatgccgggcagagcgtacctcatcagccgctgctgcaacagcaaggg
gcgccgatatcggcggtggtgacatccccgtcgcactaa
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