Dickeya fangzhongdai ND14b: LH89_22020
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Entry
LH89_22020 CDS
T03347
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced01501
beta-Lactam resistance
ced02010
ABC transporters
ced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LH89_22020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH89_22020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LH89_22020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_22020
Transporters [BR:
ced02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
LH89_22020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AIR71757
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All DBs
Position
4985001..4986632
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AA seq
543 aa
AA seq
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MQFRYSAVSVGVVSAVLMTALINPVGAAQVPPGAVLADRQEIVRHIKDEPASLDPIKAVG
LPEIQVIRDLFEGLVNQDAQGNPIPGVAQRWQTNDNRTFIFTLRPDARWSNGDPVTAKDF
VYSWRRLATPQNTSPFSWFIRLAGIVNADDILSGKLPADKLGVIAVDDHTLKVQLSKPVP
YFISLMANFSLYPVHQATVEKYGNAWIKPGNLVGNGAFVLKDRVVNEKLVLVPNNHYWDH
VNTRLTQVTFVPINQESNATKRYQASDIDITESFPKNQYQKLLKDLPGQVFTPDQLGTYY
YAFNTQRAPTNDVRVRKALSYAIDRKIIAGKVLGTGEKPAYRFTPDVTAGFKPQPGQLQQ
YSQAELDMQAKALMAAAGYGPSKPLKLTLLYNTQEVHQKIAIAVASMWKAKLGVDVKLVN
QEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLSLLTASHSGNIARFNNADYDRLMADTA
GQTDRKVQNEDYNRAEQILAEQAPIAPIYQYTNGRLIKPWVKGYPITNPEDVAYSQTLYI
LKH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcgttattccgcagtttccgtgggcgtggtttccgccgtgctgatgacagcc
ttgataaacccggtgggtgcggcgcaggttcctcccggcgccgttctggcggaccgacag
gagatcgtccgtcatatcaaggatgaaccggcttcgctggacccgattaaagcggttggt
ttgccggagattcaggtgattcgcgacctgttcgaagggctggtgaatcaggacgcgcag
ggtaacccgattcccggcgtcgcccagcgctggcagactaacgataaccgcaccttcatt
tttactctgcgccctgatgcgcgctggtcgaacggcgatccggtcaccgctaaagatttt
gtctacagctggcggcgactggcgacgccgcaaaatacctcgccgtttagctggttcatc
cggctggcggggatcgtcaatgctgatgatatcctgtccggcaagctgcccgccgacaag
ctgggcgtcattgcggttgacgatcacacgttaaaggtgcaactgagtaagccggtgcct
tatttcatcagcctgatggctaatttcagcctttatccggtgcatcaggccacggtggaa
aaatacggcaatgcgtggatcaaaccgggcaatctggtgggtaacggcgccttcgtgctc
aaagatcgggtggtcaatgaaaaactggtgctggtgccgaataatcattactgggatcac
gtcaatacccggctgacgcaggtcacctttgtgccgatcaatcaggaatccaacgccacc
aagcgctatcaggccagcgatatcgacatcaccgagtcgtttcccaagaatcagtatcag
aaactgctgaaggacctgccggggcaggtcttcaccccggaccagctcggcacttactac
tatgcgttcaacacgcagcgcgcgccgaccaacgacgtgcgggtacgcaaggcgctgtct
tatgccatcgaccgtaagattatcgccgggaaagtgttgggaaccggcgagaaaccggcc
tatcgctttacgccggatgtcaccgccgggttcaaaccgcaaccggggcaactgcagcag
tattcgcaggccgaactggatatgcaggccaaagcgctgatggcggcggccgggtatggt
ccgtccaaaccgctgaaactgacgttgctgtacaatacgcaggaagtgcatcaaaaaatc
gccatcgccgtcgcgtcgatgtggaaagccaaactcggcgtagacgtgaaactggtgaat
caggaatggaaaacctacatcgatagccgcaatacggggaattttgatgtcatacgcgcc
tcctgggtcggcgattacaacgaaccgtccacctttctgtcgttgctgaccgccagtcat
agcggcaatatcgcccgtttcaacaacgccgattatgatcgactgatggcggatactgcc
ggacagactgaccgaaaagtacagaacgaggattacaaccgcgccgagcagattttggcg
gagcaggcgccaattgcgccgatttaccagtacaccaacgggcggttgattaaaccctgg
gtgaaagggtatcccatcactaatcctgaggatgttgcctacagccagacgctctatatt
ttgaaacactga
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