Dickeya fangzhongdai ND14b: LH89_22175
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Entry
LH89_22175 CDS
T03347
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH89_22175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_22175
Transporters [BR:
ced02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LH89_22175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIR71783
LinkDB
All DBs
Position
5020128..5021729
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AA seq
533 aa
AA seq
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MKAWFAILLTLTLMASPPVKALTPDNTLVVAISLNSIISFDPAESFETVSNSCLASLYQG
LVASDRNQPTQLNPDLALAWREGHDGRSLIFTLDPNAVFASGNPVLADDVIYSLTRAVKL
NKTPVFILNELGWMPANIDGQFRKIDDHQLEIRWTSDIGSELVLRLLSASVALIVDSKLV
EKHSDSGDFGNQWLRSRSAGSGSYQIRHYLPQQALLLESNPYARRQPELAQVILKDVADP
SVRRLLLLQGDVDVAYDLGADQFSALENQPGINVNLASGAKIYYLGFNTRSSAAPFLGQP
AFWQAARWLVDYQGIANRLLKRQFRVHQNFLPQGFDGAAMEKPFRLDVDKARSILHDAGI
APGSRFTLLVANQPPYVEVAQALQDSFARADIYIDVQTVVESELWTRMRRGRFQAVFTYW
GPDYIDSSSNASAFALNQPDTPGTLAARLGWVIPELSRLTNAAAAQRDPQTRRDIYLQLQ
QAVRENSPFVVMLQGNRLVAVRNTILNVRQSIANSMLYFDEIIKVKAETPASP
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcatggtttgccattctgctgacgctgaccctgatggccagcccgccggtgaag
gcattgacgccggataatacgctggtggtggctatctctctgaatagcattatcagtttt
gatccggcggaaagtttcgaaaccgtcagcaacagctgtcttgcctcgctttaccagggg
ctggtggcgagcgatcgtaatcaacctacccaattgaaccccgatctggcgcttgcctgg
cgtgaaggccatgacgggcgcagcctgatttttacccttgaccccaacgccgtattcgcc
tccggtaatccggtgctggccgatgacgtcatctattcgctgacccgggcggtgaagctc
aacaaaaccccggtgttcattctgaatgaactggggtggatgccggcgaatattgacggg
cagttccggaaaatcgacgatcatcagctggagatccgctggaccagcgatatcggcagc
gaactggtattacgtctgttatcggccagcgtggcgctgattgtcgacagcaaactggtg
gagaaacacagcgacagcggtgattttggcaatcagtggctgagaagccgctcggcgggc
agcggcagctatcagattcgccattatctgccgcagcaggcattgctgctggagagtaac
ccgtatgcgcgccgccagcccgagctggcgcaggtgattctgaaagacgtggcggacccg
agcgtgcgccgtttgttgctgctgcagggcgacgtcgatgtggcctacgatctgggcgcg
gaccaattcagcgcgctggagaatcagccgggcatcaatgtgaatctggcgtcgggcgcg
aaaatttactatctgggcttcaatacccgcagtagcgcggcgccttttctggggcagccc
gctttctggcaggcggcgcgctggctggtcgactatcagggcatcgccaatcgcttgctg
aaaagacaatttcgggtacaccagaatttcctgccgcaggggtttgacggcgcggcgatg
gagaaaccgttccggctcgatgtggataaagcccggagcatattgcacgacgccgggatt
gcgccgggcagccggtttacgctgctggtagccaaccagccgccctatgtcgaggtggcg
caggcgctgcaggacagtttcgcccgcgccgatatctatatcgatgtgcagacggtggtg
gagagcgaactctggacgcgcatgcgccgcgggcgttttcaggcggtattcacctactgg
gggccggactatattgactccagcagtaatgccagcgcgttcgccctcaaccagcctgat
accccgggtacgctggcggctcgcttgggctgggtcatcccggagttgagccggttgacc
aacgccgcggctgctcagcgcgatccgcaaacgcgacgcgatatctacctgcaattgcag
caggcggtcagggaaaactcgccgttcgtggtgatgctgcagggcaaccggctggtggcg
gtgcgcaatacgatattgaatgtccggcagagcatcgccaattcgatgctctattttgat
gagattatcaaggtgaaggctgagacacccgcatcgccgtga
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