Corynebacterium endometrii: CENDO_04615
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Entry
CENDO_04615 CDS
T06552
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cee
Corynebacterium endometrii
Pathway
cee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CENDO_04615 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cee03019
]
CENDO_04615 (deaD)
03009 Ribosome biogenesis [BR:
cee03009
]
CENDO_04615 (deaD)
Enzymes [BR:
cee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CENDO_04615 (deaD)
Messenger RNA biogenesis [BR:
cee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CENDO_04615 (deaD)
Ribosome biogenesis [BR:
cee03009
]
Prokaryotic type
rRNA helicases
CENDO_04615 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
PIN_9
UvrA_inter
adh_short
PrpR_N
Cj1289-like_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QCB28213
UniProt:
A0A4P7QFA9
LinkDB
All DBs
Position
1010263..1012341
Genome browser
AA seq
692 aa
AA seq
DB search
MSITDNATGGVNEPEDNFNQSESQEISQGVEASNASENHDTGAAETSEDAGAENNDSANE
QSQGFANLDLPEQVQQAVAKVGFTTPSPIQQQTIPLLMEGRDVVGLAQTGTGKTAAFALP
ILSRIDEQARHPQALVLAPTRELALQVADSFQSFADHLGRIEVLPIYGGQAYGIQLSGLR
RGAQIIVGTPGRVIDHLEKGSLDISQLRYLVLDEADEMLNMGFQEDVERILADTPADKQV
ALFSATMPNSIRRLSKQYLNEPAEVTVKSERRTNDNITQRFLLIPHRQKMDAFTRILEVI
DYDAIIVFVRTKHETENVAEQLRAQGYNAAAINGDIAQQQRERTVDQLKDGRLDILVATD
VAARGLDVERITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERV
TNARLEEMDLPSVDEVNAKRKENFYQSITEKLGDSQFDMFRGMVRKYSETNNVAMDDIAA
ALAVAAQGDAEFLMKEQPAPKRDRRDRFDRDDRGGRDRGGRDRAGFRDRGRDRGERRPDG
DFETYRIAVGKRQNVRPGAIVGAIANEGGLSSKDFGRITIAVGHTLVDLPKNLDPAVLDR
LKDTRISGQLINIQKDTGRPPRRDYDDDRGGRGGRGGYRGRDDRDRGGRGGWRDRDDRGG
RDRGGRGGGRGGFRDDRSGRGGDRGGRGRWRD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccactggcggcgtgaacgagccagaagataattttaatcag
tcggaatctcaggaaatctcgcaaggtgtcgaagcaagcaatgcttctgaaaatcatgac
accggggctgcggaaacttctgaggacgccggcgccgagaacaatgactcggccaacgaa
caatcccaggggtttgcgaatcttgacctcccagagcaggttcagcaggcagtagccaag
gtaggatttaccaccccttcaccaattcagcagcagactatccctctgctcatggagggc
cgcgacgtagtaggccttgcgcagaccggtacgggcaagacggcggcgtttgcgctgccc
atcctttcccgcatcgatgagcaggcgcgtcacccacaggccttggtgcttgccccaacc
cgtgagctggcactgcaggttgctgattccttccagtccttcgccgaccacctaggccgc
atcgaggtgctgccaatctacggtggtcaggcctacggtatccagctgtccggcctgcgc
cgcggtgcacagatcatcgtgggtaccccgggccgcgtcatcgaccacctggaaaagggc
tccttggacatctcccagcttaggtacctcgtgctcgatgaggctgatgagatgcttaac
atgggtttccaggaggacgtggagcgaatcctggctgatacgccggcggacaagcaggtt
gctttattctccgcgaccatgcctaattcaattcgccgcctgtccaagcagtacctgaat
gaacccgcggaagttacggtcaagtccgagcgacgaaccaatgacaacatcacccagcgc
ttcctgctgatccctcaccgccagaagatggatgcgtttacccgcatcctcgaggtcatt
gactacgacgcaatcatcgtctttgtacgcaccaagcatgagaccgaaaacgtggctgag
cagctgcgtgcgcagggttacaacgccgcagcgattaacggcgatattgcccagcagcag
cgcgagcgcaccgttgatcaactcaaggatggacgtctggacatcttggtggccaccgat
gtggcggcccgcggcctagacgttgagcgcattacccacgtggtcaatttcgacatcccg
aacgacactgaatcctacgtgcaccgcatcggccgcacgggccgcgcgggtcgttccggt
gaggcgattttgtttgtcacccctcgcgagcgccgcatgctgcgctccatcgagcgcgtt
actaatgcgcgcctggaagagatggatctgcccagcgttgatgaagtcaatgcgaagcgt
aaggaaaacttctaccagtcaatcacggagaagctgggcgattcgcagttcgatatgttc
cgcggcatggttcgcaagtattccgagactaacaacgtggctatggatgacatcgccgca
gcgttggccgtagccgcgcagggcgatgcagagttcctgatgaaggagcagccggctccg
aagcgagaccgtcgcgaccgtttcgatcgcgatgaccgtggcggcagggatcgtggaggc
cgtgaccgtgctggtttccgggaccgtggccgcgaccgcggtgaacgccgtccggatggc
gactttgagacctaccgcatcgcggtgggcaagcgccagaatgtacgcccaggggcaatc
gttggcgcaatcgccaacgagggtggcttgtcctccaaggactttggccgcataactatt
gccgtgggacacacactggttgacctgcctaagaacctggaccctgcggttcttgaccgc
ctgaaggatacccgaatctcaggccagctgattaacatccagaaggatacgggccgtcct
cctcgccgggactacgacgatgaccgtggtggccgtggaggccgtggtggctaccggggc
cgcgacgatcgtgatcgtggtggccgtggcggttggcgcgaccgcgatgaccgcggcgga
agagaccgtggcggccgcggcggtgggcgtggcggtttccgtgatgatcgtagtgggcgc
ggtggtgaccgtggcggccgcggccgctggcgcgattaa
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integrated database retrieval system
