Corynebacterium endometrii: CENDO_05740
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Entry
CENDO_05740 CDS
T06552
Name
(GenBank) ski2-like helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cee
Corynebacterium endometrii
Brite
KEGG Orthology (KO) [BR:
cee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cee03019
]
CENDO_05740
Enzymes [BR:
cee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CENDO_05740
Messenger RNA biogenesis [BR:
cee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CENDO_05740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
WHD_DUF6293
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QCB28428
UniProt:
A0A4V1CEK5
LinkDB
All DBs
Position
complement(1256080..1258893)
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AA seq
937 aa
AA seq
DB search
MTHSFLEEFSSTLPYALDDFQLEGCAAVEAGHGVLVCAPTGAGKTIVGEFAVALALSRGT
KCFYTTPIKALSNQKYHDLCSVHGEEAVGLLTGDVSINSQAEIVVMTTEVLRNMIYAGSS
SLDRLTHVVMDEIHFLADASRGAVWEEVILNLDESVNVIGLSATVSNSEEFGDWLTAVRG
DTKVIVSEHRPVPLDQWMMLGRKIYPLFEPQSGGRVNTELARRIQRLEAGDSDDGRADYS
SNRAGFRSRSRHKDGGSDRNSARGRSGFSRPQDRYRPLGRPEVLKVLQGMNMLPAITFIF
SRAGCDGALYQCLRSRMVLTTEEEAARIKEIIDAGVEGIPEDDLLVLNFTQWREALSRGF
AAHHAGMLPAFRHIVEDLFVQGLVRAVFATETLALGINMPARTVILEKLVKFNGEAHVDL
TPGQYTQLTGRAGRRGIDTIGNAVVLWAPAMDPRAVAGLASTRTYPLVSTFEPGYNMAIN
LLGMVGFDESLRLLERSFAQFQADGSVVEEAREVERARHRVNELRSQLHEAIEALAPPTT
DGLDPVAAVTEYMELRRELSDEEKKSKHNSVAQRQQEVTSVLAKLRVGDVIAIAQRKAPI
LAVVTTAAKQSADPRPWVTTEDGWSGRIDATGIENPPIVVGTMRLPRPVQKNPRRNIKFV
RDSFKRNNYPRPKKMRQSPRVRPSKKVGRLRDELRAHPVHSWPATDREQLARLAQKLIRR
ERELARLAKTVETARDTLGRTFERIVDLLSEMNYVEFEGAGTERRPVITDEGQRLALIHN
DTDLLVAQCLRRGIWNDLDPAELAGVVSLCCFENRKNTGGQPEAATDRMADAMSATWRIY
TELVADERRHQLPLTREPEAGFALAIHQWAAGAPLAYCMAAAGESGAELTPGDFVRWCRQ
VIDLLQQVAKTGYTEEIKTNARRAIDAIQRGVVAIGA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgacgcattcttttctggaagagttttcatcgactctgccgtacgcccttgatgacttt
cagcttgagggctgcgcagcggtagaagcgggacacggtgtgctggtttgcgcgcccact
ggcgcgggcaagaccatcgtcggcgaattcgccgtagcgctggcgctctcacggggcaca
aagtgcttttacaccacgccaattaaggcgctgagcaaccagaagtaccatgacctgtgc
tcggtgcatggtgaagaagcggtggggcttttgactggggatgtgtccatcaattcccag
gccgagattgtggtcatgaccaccgaggtacttcgcaacatgatctacgcgggctcctcc
agccttgatcgcctaacccacgtggtaatggacgaaattcacttcctcgctgacgcctca
cgcggcgcggtgtgggaggaggtcattctcaacctggatgaatcggtcaacgtcatcggt
ttgtccgctaccgtgtccaattccgaggaatttggagattggctcaccgcggttcgcggt
gacaccaaggtgatcgtttccgagcaccggccggtgccgttggatcagtggatgatgctt
gggcgcaagatctacccgctgtttgagccgcagtccggcgggcgcgtcaacactgagctg
gctaggcgcatccagcgcttagaggcgggcgatagcgacgatgggcgagccgattactca
agcaatagggccggtttcaggtcccgctccaggcacaaagacggaggaagcgaccggaat
tcggcacgtgggcgctcgggtttctcgcgtccccaggaccgctaccgtccgctcggaagg
cccgaggtgctcaaggtattgcagggcatgaatatgctgcctgccattacttttatcttc
tcccgcgccggatgtgacggcgcgctctaccagtgcttgcgttcacggatggtcttgacc
acggaggaagaagcagcgcgcattaaagaaattatcgacgccggtgtagagggcatccca
gaagatgaccttctggtgctgaactttacccagtggcgcgaggcactttcacgcggattc
gctgcgcaccatgcgggcatgcttcccgcattccgccatattgttgaagatttgttcgtg
cagggcttggtacgcgcggtgttcgccaccgaaaccctggccttggggatcaacatgccg
gcacgcaccgtgatcctagaaaagctcgtcaaattcaacggcgaggctcacgtagatctg
acacccggccaatacacgcagctgacgggccgtgcgggaaggcgcggaatcgatacgatt
ggtaatgccgtagtgctgtgggcccctgcgatggatcctcgcgcggtggcgggactggcg
tcgacgcgcacctatccgttggtttccacctttgaaccgggctacaacatggccatcaac
ttgttgggcatggtgggcttcgatgaatctctgaggctgcttgagcgttctttcgctcag
ttccaggcggacggttccgtcgtggaagaagcccgcgaggtggaacgcgcccggcatcgc
gtcaacgagctgcgtagccaactccatgaggctatcgaggcgttggccccgccaaccact
gatggcctcgatccggttgcagcggtcacggagtacatggagctgcgacgggagcttagt
gatgaagaaaagaaatccaagcacaactccgttgcgcagcgccaacaggaggttacatcg
gttctcgcaaagctgcgggttggtgatgtaatcgctattgcccagcgaaaggcgccgata
ctggctgttgtgaccaccgcggcgaagcagtccgcggatccacgcccatgggtcaccacc
gaagatggctggtccggccgcatagatgcgaccggaatagaaaacccaccgatcgtggtg
ggcacgatgcgcctgccacgccccgtgcaaaagaacccgcgacgaaacattaaattcgtg
cgtgattcattcaaacgcaacaactatccccggccgaagaagatgcggcagagcccgcgc
gtgcggcccagcaagaaggttggacgtttgcgcgatgagctgcgcgcgcatcctgtgcat
tcgtggccagcgactgatcgtgagcaactagcccgcttggcgcaaaagctcattcggcgt
gagagggaactagcccgcctggccaagacggtggaaacggctcgggatacgctgggccgg
acctttgagcgcattgtggatttgctctccgaaatgaattacgtcgagttcgagggcgcg
ggtaccgagcgcagaccagtgattacggacgagggtcagcgcttagcccttatccataac
gatactgacttgctggtggcccagtgccttcgccgtggaatctggaatgatttggacccg
gccgaactggccggggtggtctctttgtgctgcttcgaaaaccggaaaaacactgggggt
cagccggaggcggccacggataggatggctgatgcgatgagcgcgacgtggcgcatctac
acggaactcgttgccgacgaacgccgtcatcagcttccgctaacccgtgaacccgaggcc
ggttttgccttagccatccaccagtgggcggcgggtgcgccgctggcgtactgcatggcg
gcggcaggggagtctggcgctgagcttaccccgggcgattttgtgcgctggtgccggcag
gtcatcgatctgctccaacaggtagcaaagaccggttacacagaagaaattaagaccaat
gcccgcagggctatcgatgccatccagcgcggcgttgttgccataggagcctag
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