Corynebacterium endometrii: CENDO_06915
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Entry
CENDO_06915 CDS
T06552
Name
(GenBank) Putative ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cee
Corynebacterium endometrii
Pathway
cee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CENDO_06915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cee03019
]
CENDO_06915
Messenger RNA biogenesis [BR:
cee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CENDO_06915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QCB28657
UniProt:
A0A4P7QIL0
LinkDB
All DBs
Position
complement(1512712..1514856)
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AA seq
714 aa
AA seq
DB search
MTETRNRSRKVTRKAGPPAETTDTASNEAASPVFQAPTADASASGGNGQGGNSKTAANND
NNENSGQNDKKSGNGNRRSNRSRGSRGGRNNNGGGNNNNGSNGQNGKGGGNNRGNRNNGN
NRGRRNVPKSMQGADLTKRLPEPPKQAKDSLRIYALGGISEIGRNMTVFEYDGKLLIIDC
GVLFPSSGEPGVDLILPDFGPIENKIDKVEALVVTHAHEDHIGAIPWLLKLRPDIPIVAS
RFTIALIAAKCKEHRQRPKFIEVNEKSDVKYGPFRCRFWAVNHSVPDALGIMLNTPAGSV
VHTGDIKLDQTPLDNRPTDLPALSRYGDEGVDLMLCDSTNANIPGVSASEGDIPATFKRL
VAGAKQRVIIASFASNVYRVQAAIDAAVAAGRKVAFNGRSMIRNMEIAEKMGFLKVPRGT
IVSIDDASKMAPHKVVLITTGTQGEPMAALSRMARREHRQITVRDGDLIVFSSSLIPGNE
EAVFGVMNMLSQIGAEVITNKEAKVHSSGHGYGGELLFLYNAARPKNAMPVHGEWRHLRA
NKELAISTGVDRDRVVLAQNGVVVDLAKGRANVVGQIQVGNLYVDGVSMGNVDADTLTDR
TNLGAGGVVSITCVIDNRTARLLEHPTVATTGFSEDDRNVVPEIAELVENTMNDLAAEGE
NDTYRMVQKLRRKVGKLMSSKYKREPVILPTIVPTSGDGSYIDDDEVRASRESL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacccgtaaccgctcccggaaggtgacccgcaaggcgggccctccggcagag
accaccgataccgcctctaacgaggcggcttcgcctgttttccaggctccaaccgcagac
gcctctgcgtccggtggtaacggtcaaggcggcaacagcaaaactgccgccaacaatgac
aacaatgagaactcgggccagaatgacaagaaatctggcaatggaaaccgtcgttccaat
cgatcccgcggctcccgcggcggccgcaacaataacggcggcggcaacaacaacaacggg
agcaacggccagaacggaaagggcggcggcaacaaccgcggtaaccgcaacaacggtaat
aaccgcggccgccgcaacgttccgaagtccatgcagggcgcggatctgaccaagcgcctt
ccggaaccaccgaagcaggccaaggattccctgcgcatttacgcgctgggcggcatttcg
gagatcggccgcaacatgacggtcttcgagtatgacggcaagctgctgataatcgactgt
ggtgttctgttcccgtcttccggcgaacctggcgttgacctcatcctcccggatttcggc
ccgatcgaaaacaagattgacaaggtagaggcgctggtggttacccacgcccacgaggat
cacatcggcgctatcccatggctgcttaagctgcgcccggacatccccatcgtggcatcc
cgcttcaccatcgctctaatcgcggcaaagtgtaaggagcaccgtcagcgccctaagttc
atcgaggtcaacgagaagtccgatgtgaagtacggtcctttccgttgccgcttctgggcc
gtaaaccactccgtcccggacgcgcttggcatcatgctgaacaccccggcgggctctgtc
gtccacaccggtgacatcaagctagaccagaccccactggataatcgtccaaccgatctt
ccagccctgtcgcggtatggcgatgagggcgtggacctgatgctgtgtgattccaccaat
gcgaatattccgggcgtgtccgcctctgaaggagacattccggctacattcaagcgattg
gtcgcaggggccaagcagcgggttatcatcgcttccttcgcctccaacgtttaccgcgtg
caggccgctattgacgccgcggtggccgccggccgcaaggttgcgttcaacggccgctcc
atgatccgcaacatggagatcgctgagaagatgggctttttgaaggtgcctcgcggcacc
atcgtctccatcgatgacgcctccaagatggctccacacaaggtggtgctcatcaccacg
ggcacccagggtgagccgatggcggcgctgtcccgcatggcgcggcgcgagcatcgccaa
atcaccgtgcgcgacggtgacctgatcgtcttctcttcctcactgattccgggtaacgag
gaagcggtattcggcgtgatgaacatgctgtcccagatcggtgcggaagttatcaccaac
aaggaggctaaggtccactcctcgggccatggctacggtggcgagctgctcttcctgtac
aacgcggctcgtccaaagaatgccatgcctgttcacggcgagtggcgccacctgcgggcc
aacaaggaactggctatttccaccggcgttgaccgcgaccgcgtggtcctggcccaaaat
ggcgtggtcgtggatctcgcaaagggccgcgcgaacgtggtgggtcagatccaggtgggt
aacctgtacgtggacggcgtgtccatgggcaatgttgatgctgacaccctgacggaccgc
accaacctcggcgccggcggcgtggtatctatcacctgcgtgattgataaccggaccgcc
cgattgctggagcacccaaccgtggccaccaccggtttctccgaggatgaccgcaacgtt
gtcccagagatcgccgaattggtcgaaaacactatgaacgacctggccgccgagggtgag
aatgacacctaccgcatggttcagaagctgcgccgcaaggtgggcaagctgatgagctcc
aagtacaagcgagagccggttatcctgcctaccatcgttccaacctccggtgacggaagc
tacatcgatgatgatgaggttcgggcctcccgcgagtccctctaa
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