Cyanobacterium endosymbiont of Epithemia clementina: P3F56_00295
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Entry
P3F56_00295 CDS
T09382
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Pathway
ceec03410
Base excision repair
ceec03430
Mismatch repair
ceec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P3F56_00295 (recJ)
03430 Mismatch repair
P3F56_00295 (recJ)
03440 Homologous recombination
P3F56_00295 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceec03400
]
P3F56_00295 (recJ)
DNA repair and recombination proteins [BR:
ceec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
P3F56_00295 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
P3F56_00295 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P3F56_00295 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WGT67590
LinkDB
All DBs
Position
86451..88784
Genome browser
AA seq
777 aa
AA seq
DB search
MLEDKWQIIPFSLIPQWFLTIVKSYTPNSDGKHVAQILWKRGIKNKDELIAFIDPDVYHP
TSPFAFGEEMKWAVKRLKKAYNNQEKVTIWGDFDADGITSTSVLWEGLGQFFPPHLQLDY
YIPNRITESHGLNRQGIEKLAASGTRLVVTCDTGSTNLTEIDYANELGIDMIITDHHALP
DTRPPVIAMINPRCLSTNHPLFNLSGVAVAYKLVEAFYQKLPDVPKEPLEQLLDLVAIGL
IADLVELKGDCRYLAQKGIQHLQKQRQLSTRPGVAKLLELCKKNGDRPTDISYGIGPRIN
AISRIYGDATFGVELLTSRDIKLCHELALKTELANARRKEIQQRVYKDVKKKLSQIDLST
VGVIVLEDTQWDSGVLGLVAGKIAQEYNRPTILLTVTKTGNEAQAEVIKMVRGSARSVNQ
IDLYKLVDSQQNLLHRFGGHPFAAGLSLPLKNLTLFKEGINQQFRQKINNINYIQTAVEV
DLIVTVVDLGQDLFRELKLLEPCGIGNSTPKLLLKNCWFDNIWNKNIEDTKRNKIQYIKT
VFEIHDFSTKRGFPGVWWEHYKDELPFSKPQDAIVELYFNSYSKRYEVRLIAIRDYITDI
EIDQNTNNDNCLLDWRNKEFLGKVTTKIKVLQECPKSWDELLKIYHQTQQKKLKLALAYN
SPKYINSLQVWRQLLGIAKYYSRTQDLINIGQMRMKLELSDYTLKLGLATLYKLGFYCKI
IDDKLKFVWNNKIANNAEKKVSQFLEVVEEEQFQHRYFSEISLECIQEKISTSNIKR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagataaatggcaaataatacctttttcattaattcctcagtggtttctaaca
attgttaaatcctatactcctaattctgatggaaaacatgttgcccaaatattatggaaa
cgaggaattaaaaacaaagatgaacttatagctttcattgatcctgatgtctatcatcca
actagtccttttgcttttggagaagaaatgaaatgggcagttaaacgccttaaaaaggct
tataacaatcaagaaaaagtaacgatatggggagattttgatgctgatggaattacctca
actagcgttctttgggagggactagggcaattttttcctcctcatcttcaacttgactat
tatatccctaatcgtattacagaatctcacggattaaatcgtcaaggaattgaaaaatta
gcagcatcaggaactcggttagttgtgacttgtgatacagggagtaccaacttaactgag
attgactatgctaatgagttaggtattgatatgattatcaccgatcatcatgctttacct
gatactcgtcctcctgttattgctatgatcaatcctcgttgccttagcacaaatcatccc
ctatttaatttatcaggagtagcagtagcctataaattagtcgaagcgttttatcaaaaa
ttacctgatgttcctaaagaaccgttagaacaattattagacttagttgctataggatta
attgccgatttagttgagttaaaaggagattgtcgttatctagcacaaaaaggtattcaa
cacctacaaaaacagcgacaacttagcacccgtccaggagttgctaaattattagaatta
tgtaaaaaaaatggtgatcgccccactgatatttcttatggtatcggacccagaattaat
gccattagtcgcatttatggagatgctacatttggggttgagttattaaccagtcgtgat
ataaaactttgtcacgaacttgctttaaaaactgaattagctaatgcaaggcgcaaagaa
atacaacaaagagtttataaagatgttaaaaagaaactatctcaaattgatttatcaacc
gtgggagttattgttttagaagatactcaatgggatagtggagttttaggattagttgcc
ggaaaaattgctcaagaatataatcgtccaacaattttattaaccgtaacaaaaacaggt
aatgaagcccaagctgaagtcatcaaaatggttagaggttccgcgcgctcagttaatcaa
atagatttatataaattagtagattctcaacaaaatttgttacatcgttttggaggacat
ccttttgctgcagggttaagtttacctctaaaaaatctaactttatttaaagaaggtatt
aatcaacaatttcgacaaaaaataaataatatcaattatatacaaacagcggttgaagta
gatttaattgttactgttgttgacctaggacaagatttatttcgagaactaaaattatta
gaaccatgtggaataggtaattctacccctaagcttttactaaaaaattgttggtttgat
aatatttggaataagaatattgaggacacaaaaagaaataaaatacaatacataaagaca
gtttttgagattcatgatttttctaccaaaagaggatttcctggagtttggtgggaacat
tataaagatgaacttccttttagtaaacctcaggatgcaattgttgaactatactttaat
tcttattctaaacgttatgaagttagattgattgctatcagagactatataactgatatt
gaaattgatcaaaatactaacaatgacaattgtttgttagattggcgtaataaagaattt
ttgggaaaagtaactactaaaattaaagtattacaagaatgtcctaagagttgggatgag
ctattaaaaatatatcatcaaactcaacagaaaaaacttaaacttgctcttgcttataat
tcaccaaaatacataaattctctacaagtttggcgacaattattaggaattgctaagtat
tatagtcgtactcaagatcttatcaatataggacaaatgaggatgaaattagaactaagt
gattacaccctaaaacttggattggcaaccttatataaattaggattttattgtaaaata
atagacgataaacttaagtttgtctggaacaataaaattgctaataatgcagaaaaaaaa
gtaagtcaatttctagaagtggttgaagaagaacaattccaacatagatatttttctgaa
atttctcttgaatgcatccaagaaaaaatttctactagtaatataaaaagataa
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