Cyanobacterium endosymbiont of Epithemia clementina: P3F56_02005
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Entry
P3F56_02005 CDS
T09382
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceec03400
]
P3F56_02005 (sbcD)
DNA repair and recombination proteins [BR:
ceec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P3F56_02005 (sbcD)
Archaeal homologous recombinant proteins
P3F56_02005 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Motif
Other DBs
NCBI-ProteinID:
WGT67884
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Position
637227..638522
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AA seq
431 aa
AA seq
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MIKIIHLSDIHLGSGFTYGHLNPKTGLNTRFEDFINTLSLCIDRAVREKIDLVLFGGDAF
PDATPPPYVQEAFASQFHRLADAKIPTILLVGNHDQHSQGDGGASLCIYRTLGVPGFIVG
DTLKTNKISTKNGEIQVITLPWLTHCTLFTRRKTDNLSFEEVQHLLIESLTLALEGEIRQ
LDPQLPTILLGHLMADRANLGAEKFLAVGKGFTIPMSLLIRPEFDYVALGHVHKHQNLNP
TNDPPVIYSGSIERVDFSEEKEDKGYIYLEINKGKVDWQFNPLPSRNFCSININVSEEFY
PQFAILKAIQKKSIQNSVVRLIYKIRSEQLELINTGEIYEALEESHSYTIRPELVSQLSR
SRLPELGVGNNLDPISALQAYLDSKEDLKEIVKDMLETAKFLLNNNDPNLDLSVKQKILP
LEDLETFSFEE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaattattcatctatctgacattcatcttggtagtggctttacctatggtcac
ctcaatcctaaaacaggtttaaacacccgctttgaagattttatcaacacattaagttta
tgtattgatcgagcagtgagagaaaagattgatcttgttttatttggaggagatgctttt
cctgatgcaacccctcctccctatgttcaagaagcttttgcttctcaatttcatcgtctg
gctgatgccaagattcctacaatattattagttggaaatcatgaccaacattctcaaggc
gatggaggcgcaagtctttgtatttatcgaacattaggtgttccagggtttattgtgggg
gacactcttaaaaccaataaaatatcgactaaaaatggagaaattcaggtgatcactttg
ccttggttaacccattgtactctctttactcgtcgaaaaactgataacttatcttttgaa
gaagttcagcatttattaattgaaagtctgaccttagctttagaaggagaaattcgtcaa
ctagatccccaacttccgactattttgttaggtcatttgatggcagatcgcgctaatctt
ggagcagagaagtttcttgctgttggcaagggatttaccattcctatgtctttattaatt
cgtcctgaatttgattatgttgcacttggtcatgttcataaacaccaaaatttaaatcct
actaatgatcccccagtaatttactcaggaagtattgaacgggtagattttagtgaagaa
aaagaggataaaggttatatttatttagaaataaataaaggaaaagttgattggcaattt
aatccacttcctagccgtaatttttgttctattaatattaatgtatcggaggaattttac
cctcaatttgctatccttaaagccattcaaaaaaagtctatacaaaattcagtagtacgc
ttaatttacaaaattcgttctgaacaattagaattaattaatacaggggagatttatgaa
gcattagaagagtcccatagttatactattagaccggaattggtcagtcaattatcccgt
tctcgtctaccagaattgggggtgggaaataatttagatcccatatctgctttgcaagct
tatttagatagcaaagaagatcttaaagagatagttaaagatatgttagaaacagctaaa
tttttactgaataataacgatccaaatttagatttatcagttaaacagaaaattttacca
ttagaagatttagaaacttttagttttgaggaatag
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