Cyanobacterium endosymbiont of Epithemia clementina: P3F56_02550
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Entry
P3F56_02550 CDS
T09382
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Pathway
ceec03030
DNA replication
ceec03430
Mismatch repair
ceec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P3F56_02550
03430 Mismatch repair
P3F56_02550
03440 Homologous recombination
P3F56_02550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceec03032
]
P3F56_02550
03400 DNA repair and recombination proteins [BR:
ceec03400
]
P3F56_02550
Enzymes [BR:
ceec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P3F56_02550
DNA replication proteins [BR:
ceec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P3F56_02550
DNA repair and recombination proteins [BR:
ceec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P3F56_02550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
SLBP_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
WGT67981
LinkDB
All DBs
Position
770123..772828
Genome browser
AA seq
901 aa
AA seq
DB search
MSFVGLHIHSEYSLLDGASQLNALVDRAVELEMPAIALTDHGVMYGVIELMKVCRNKGIK
PIIGNEMYVINEDIEVNQRHRRYHQVVLAKNTQGYRNLVKLTTISHLKGIQGKGIFSRPC
INKELLEQYYEGLIVTSACIGGEIPQKILAGDLKEAKRIAKWYQKIFKDDFYLEIQDHGS
QEDRIVNREIVEIADKLNIKIIATNDSHFISCYDVEAHDALLCIQTQKLITEDKRLRYSG
TEYLKSAEEMRLLFRDHLPDSVIEEAINNTLEVADKIEHYKNIFGEPRIPNYPVPSGHNP
DSYIEEITWEGLTKRLKCRLREEIPDNYKERLEYELKMLQRMGFSTYFLVVWDYIKYARD
HKIPVGPGRGSAAGSLVAYSLKITNIDPVHHGLLFERFLNPERKSMPDVDTDFCIERRDE
MIKYVTEKYGKANVAQIITFNRMTSKAVLKDVARVLNIPYADSDKMAKMIPVSRGKPTKL
KVMISDETPEPKFKEAYDSQEVDIKDDKGNVIGQIPVRNWVEMAIRIEGTNKTFGVHAAG
VVISSEPLDEVVPLQKNNEGAVITQYFMEDLESLGLLKMDFLGLRNLTTIQKTADLVKQN
RNLDLDLDQLPLEERKALQIIAKGTAKKLPDDIDKTYKLLARGDLEGIFQLESSGMKQIV
KDLKPSGIEDISSILALYRPGPLDAGLIPKFIDRKHGKEAIQYEHYLLESILKETYAVLV
YQEQIMKMAQDLAGYSLGEADLLRRAMGKKKISEMKKHREIFIDGSTKNGVPRNVAENLY
EQMVKFAEYCLSYDTEVLTVEYGAIPIGKVVEESLDCNIYTVDKNGFVYTQPIQQWHSRG
QQEIFEYCLEDGAIIRATKDHKFMTAEGKMFPIHDIFEQGLELRKILPGPATTEPRQIEN
N
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttggtttacatattcacagtgaatatagtctacttgatggagcgtctcaa
ctcaatgctttagttgatcgtgctgtggaattagaaatgccagcgattgctctaacggat
catggagtaatgtatggagtgatcgaactcatgaaagtttgccgtaataaaggaattaaa
ccaattattggcaatgaaatgtatgttatcaatgaagatattgaagttaatcaacgtcat
cgacgatatcatcaagttgtcttagctaagaatacccaaggctatagaaatttagtaaag
ttaacaactatatctcacctcaaaggtattcagggaaagggaattttttctcgtccttgt
atcaataaagaattattagagcaatattatgaaggattgattgttacgagtgcttgtata
ggaggggaaattccccaaaaaattttagcaggagatttaaaagaagctaaacgaattgct
aaatggtatcaaaaaatatttaaagacgacttttacctagaaatccaagatcatggttca
caagaagatcgaattgttaatcgagagattgttgaaattgccgataaattaaacattaaa
attattgcaactaatgactctcattttatctcttgctatgatgtagaagctcatgatgcg
ttactttgtattcaaacacagaagttaattacagaagataaacgtcttagatatagtggg
actgaatatctcaaatctgccgaagaaatgaggttattattcagagatcatcttcctgat
agtgtgattgaagaagcaataaataataccttagaagttgctgataaaattgaacattat
aaaaatatttttggagaacctcgcattcctaattatcccgttccttcaggacataatcct
gatagttacattgaagaaataacttgggaagggttaacaaaaaggctaaaatgtcgtttg
cgtgaagaaataccagacaactataaggaaagattagaatatgaattaaagatgttacaa
agaatgggattttcaacttattttttagtagtttgggattatattaaatatgcaagagat
cataaaattcctgttggacccggaagaggatcggctgcaggttccttagttgcttattct
ttgaaaataactaatatagatccagttcatcacggacttttatttgaaagatttttaaat
cctgaacggaaatctatgcccgatgttgatacagatttttgtattgaaagacgggatgaa
atgattaaatatgttactgaaaaatatggaaaagctaatgttgctcaaattataactttt
aaccgtatgacttctaaagcggttttaaaagatgtagctagagtgttaaatattccctat
gcagactccgataaaatggcgaaaatgattccggtttcacggggaaaacctactaaatta
aaagtaatgatttctgatgaaactccagagccaaaatttaaagaagcttatgatagtcaa
gaagtagatattaaagatgataaaggaaatgtgattggtcaaattcctgtgcgtaattgg
gtggagatggcaattcgcattgaaggaaccaataaaacctttggagttcatgctgcaggt
gtagttatttcttctgaacctttagacgaagttgttcctcttcaaaagaataatgaagga
gcagttattactcagtatttcatggaagatttagagtccctagggttgttaaaaatggat
ttcttagggttaagaaatctaacaactattcagaaaacagcagatttagttaagcaaaat
agaaatctagatttagatttagatcaattacctttagaagaaagaaaagccttacaaatc
attgctaaaggaaccgctaaaaaacttccagatgatatagacaaaacctataaactttta
gcaagaggagacttagaaggaatttttcagttagaatcatcaggaatgaagcagattgtt
aaagatctaaaaccatcaggaattgaagatatttcttctattttagctctttatcgtcct
ggtcctttggatgcgggactcattcctaaatttattgatcgtaaacatggaaaagaagcg
attcaatatgaacattatttattggaatctattcttaaggaaacctatgctgtcttagtt
tatcaagaacaaatcatgaagatggcacaagatttagctggttattctttaggagaagca
gatttattacgtcgcgcaatgggaaaaaagaaaatctcagaaatgaaaaagcatcgagag
atttttattgatggatcgactaaaaatggagttcctaggaatgttgcagaaaatttgtac
gaacaaatggttaagtttgcggaatattgtttaagttatgatacggaagtattgaccgtc
gagtatggagcaattcccatcggtaaagtggtggaggaaagtctcgactgtaatatttat
acggtagacaaaaatggctttgtttatactcaacctattcaacaatggcattcacgaggt
cagcaagaaatctttgaatattgtcttgaggacggtgccatcattcgagcaacaaaagac
cacaaatttatgactgccgaaggtaaaatgttccctatccatgacatcttcgaacaagga
ttagagttgaggaaaattttacccggtccagcgacaacagaacctcgtcaaatcgaaaat
aattaa
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