Cyanobacterium endosymbiont of Epithemia clementina: P3F56_03035
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Entry
P3F56_03035 CDS
T09382
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Pathway
ceec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P3F56_03035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceec03019
]
P3F56_03035
03016 Transfer RNA biogenesis [BR:
ceec03016
]
P3F56_03035
Enzymes [BR:
ceec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P3F56_03035
Messenger RNA biogenesis [BR:
ceec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P3F56_03035
Transfer RNA biogenesis [BR:
ceec03016
]
Prokaryotic type
tRNA degradation factors
P3F56_03035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WGT68070
LinkDB
All DBs
Position
920015..922171
Genome browser
AA seq
718 aa
AA seq
DB search
MQEFDKSISFDGRDIRLKLGLLAPQAGGAVLIQSGDTAVLVTATRTVGREGIDFLPLTVD
YEERLYAAGRIPGGFLRREGRPPEKAVLISRLIDRPLRPLCPNWIRDDIQIIATTLSMDE
EVPPDVLAVTGSSIAMIAAKIPFFGPMAAVRVGLIGDDFIINPTYREIDTGDLDLVVAGS
PDGVVMVEAGANQLPEQDIIEAIDFGYEAVRDLIQAQWDVMEALELELTTEEAPLVNEVV
EAFIRDHASESIKKVLTQYDLDKSSRDKYLDEIKESKINKVIAELPKEDPIKVATTEDPK
SIGKLYKDLTKELMRSQIVNEGVRVDGRKLDEVRPISSQVGLLPQRVHGSGLFRRGLTQV
LSLVTLGTPGDAQDLADDLHPEDEKRYLHHYNFPPFSVGETKPMRSPGRREIGHGALAER
AITPILPPKEEFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPITKPVSGAAMGLI
KEGNEVRILTDIQGIEDFLGDMDFKVAGTDNGITALQMDMKITGLPMEVVAKAIEQALPA
RLHILDRMLATIDKPRANLSPYAPRLLTMKIDPDMIGLVIGPGGKTIKGITEQTGSKIDI
ADDGTVTIAALEAEKAEKAKQIIYNMTRKLNEGEVYAGRVTRIIQIGAFVEVLPGKEGMI
HISQLAEGRVGKVEDEVAVGDEVVVKVREIDSKGRLNLTRLGIHPDEATAARRAAVTV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagtttgacaagtcaatatcttttgacggacgggatattcggctcaagttggga
ctactggccccgcaagcagggggagccgttttaatccagtctggagacacagcggtttta
gtaactgcaacaagaacagtagggagagaaggaatcgattttcttcccctaaccgtagat
tacgaagaaagactgtatgcagcaggacgtattcctgggggttttttgcgacgagaaggt
cgtcctcccgaaaaagctgttctcattagccgcctaattgatcgtcctctacgtcctcta
tgccctaattggatacgagatgatatacaaattattgctacgaccctttcgatggatgaa
gaagttccccccgacgttcttgcagtcacagggtcgtcaattgcgatgattgcggcaaaa
attccattttttggtccaatggccgcagttagagttgggttgattggagatgattttatt
attaaccccacctatcgggaaatagacacaggagacttagatctcgtagttgctggaagt
cccgatggagtagtgatggtcgaagcgggagccaatcaactgccagaacaagatatcatc
gaagcaattgactttggctatgaagcagttcgggatctcattcaagctcaatgggatgtg
atggaagcgttagaactcgaattaactaccgaagaagcaccattagtgaatgaagtggtt
gaagcatttatccgcgatcacgcctcggaatcaattaaaaaggtattaacacaatacgac
ctcgataaaagtagtcgagataaatatcttgatgagattaaagaaagcaaaattaacaag
gtgatcgcagaattgcccaaagaagacccaattaaggtagccaccactgaagatcccaaa
tctataggcaaattgtacaaagatttgacaaaagaattaatgcgttctcagattgttaat
gagggggttcgcgttgatggtcgtaaacttgatgaagtgcgtcctatttcctctcaagtt
ggtctattaccccaacgggttcatggaagtggcttattcagacgaggattaacgcaagtg
ctatctctcgttactttaggaaccccaggggatgctcaagatcttgctgatgatcttcat
ccagaagacgaaaaacgttatctgcatcactataattttcctcctttctctgtgggggaa
accaaacccatgcgttctcctggccgccgagaaattgggcatggagctttagcagaacgg
gcgatcactcctattcttcctccaaaagaagagttcccctatgtgatccgcgtagtgtcg
gaggtgttatcttctaatggttctacgtctatgggatcagtgtgtggttcaaccctagcc
ttaatggatgcaggggttcccattactaaaccggttagtggtgcagccatgggacttatt
aaagaaggaaatgaagttcgtatcttgactgatattcaagggattgaagactttttaggc
gatatggacttcaaagtagctggcactgataacggtatcactgctttacaaatggatatg
aaaatcaccggactgcctatggaggtggtcgcaaaagctattgaacaagctcttccagct
cgattacatatccttgatagaatgttagctaccattgacaaaccccgtgcgaacctatct
ccctatgctcctcgtctcctaaccatgaagatcgatcccgatatgattgggttagtgatc
ggccctgggggcaaaactattaaaggtattaccgaacaaactggttctaaaatcgatatt
gctgacgatggaaccgtaactattgcggcactcgaagccgaaaaagctgaaaaggctaag
caaatcatttataacatgacccgcaaactcaatgaaggtgaagtttatgccggtcgcgtt
acccgtattattcaaattggggcttttgtcgaagtgcttcccggtaaagaaggaatgatt
catatttcccaattagctgaaggtcgtgtagggaaggtagaagatgaagtcgctgtaggc
gatgaggtcgtggtaaaagtacgagaaatcgatagcaaaggccgcctaaacttaactcga
ttgggcattcatcctgatgaagcaacagcagcccgccgagcggcagttactgtctaa
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