Cyanobacterium endosymbiont of Epithemia clementina: P3F56_05150
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Entry
P3F56_05150 CDS
T09382
Name
(GenBank) ribonuclease H-like domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ceec03016
]
P3F56_05150
Enzymes [BR:
ceec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
P3F56_05150
Transfer RNA biogenesis [BR:
ceec03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
P3F56_05150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RteC
Motif
Other DBs
NCBI-ProteinID:
WGT66664
LinkDB
All DBs
Position
complement(1585149..1585781)
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AA seq
210 aa
AA seq
DB search
MLTLTNFQVEDCDLSDDTLRRYLATPAIAVDTETMGLIPQRDRLCLIQLCDPNGFVTAIR
IGLGQTEAPNLKQLMESKKVLKVFHYARFDVAQLLYNFKIQTQPIFCTKIASKLARTYTN
SHGLKSLVQELEGIELNKSSQSSDWGNISNLSEAQLNYAANDVLYLLSIQQKLRTMLKRE
GRWKLAQNCFDCIPVFVDLDLEQYRDIFEH
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgttaactttaacaaattttcaagttgaagattgcgatttatctgatgatactttacgc
cgttatttagctactccagccattgcggtagatacagaaactatgggcttaattccccaa
cgtgatcgtctctgtttaatacaattatgtgatcctaatggatttgttacagctattcgt
attggactaggacaaacagaagcccctaatttaaaacagttaatggaatctaaaaaagta
cttaaggtttttcattacgcacggttcgatgtcgcgcaattactgtacaactttaagatt
cagactcaacctattttctgtactaaaatcgctagtaaattagctcgtacttataccaat
tctcatggattaaaaagtttagtgcaggaattagaaggcattgaattgaataaaagttcc
caaagttcagattggggaaacatctctaatttatccgaggcacaactaaattatgcggca
aatgatgtcttatatttactatccattcaacaaaaattaagaactatgttaaaacgagag
ggaaggtggaaattggctcaaaattgttttgattgtatccctgtttttgtagatttagat
cttgaacaatatagagatatttttgaacattga
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