Cyanobacterium endosymbiont of Epithemia clementina: P3F56_06445
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Entry
P3F56_06445 CDS
T09382
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Pathway
ceec03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
P3F56_06445 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ceec03011
]
P3F56_06445 (rpsD)
Ribosome [BR:
ceec03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
P3F56_06445 (rpsD)
Bacteria
P3F56_06445 (rpsD)
Archaea
P3F56_06445 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_S4
S4
S4_2
BpuSI_N
Motif
Other DBs
NCBI-ProteinID:
WGT66886
LinkDB
All DBs
Position
1954887..1955495
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AA seq
202 aa
AA seq
DB search
MSRYRGPRLRVVRRLGELPGLSRKTPRRAYPPGQHGQGRRKRSEYAIRLEEKQKLRFNYG
VTEGQLVRYVKKARQATGSTGQKLLELLEMRLDNTVFRLGMAGTIPGARQLVSHGHVTVN
GKVVDIPSYQCRPGEVISVRNQDRSRRLVEANMEYPGLANLPSHLDFDKNTLTGKVNGII
EREWIALQINELLVVEYYSRKA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttatagaggacctcgcttaagagttgtacgacgactaggagaactccctggc
ttaagtcgcaaaaccccccgtcgtgcttatcccccagggcaacacggacaaggacgtaga
aagcgttcagaatacgctattcgtctcgaagaaaaacaaaaactgcgctttaactatggc
gtaacagaaggtcaactagtacgctatgtaaaaaaagctcgtcaagctacaggttctacc
ggtcaaaaacttctagaattgctagaaatgcgccttgataatacagtgtttcgcttaggg
atggcgggaacaattccaggagcccgtcagttagtctctcacggtcatgttaccgttaat
ggcaaagttgttgatatccctagttatcagtgccgtcctggggaagtaatctcagttcgt
aatcaggatcgttctcgtcgcctagtagaggcgaatatggaataccctggtctggccaac
cttccaagtcatttagattttgataaaaataccttgacaggaaaagtcaatggaattatc
gaacgggaatggatagctttacaaattaatgaattgttggtagttgagtattattctcgg
aaagcttag
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