Cyanobacterium endosymbiont of Epithemia clementina: P3F56_06545
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Entry
P3F56_06545 CDS
T09382
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceec03032
]
P3F56_06545
03036 Chromosome and associated proteins [BR:
ceec03036
]
P3F56_06545
03400 DNA repair and recombination proteins [BR:
ceec03400
]
P3F56_06545
DNA replication proteins [BR:
ceec03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
P3F56_06545
Chromosome and associated proteins [BR:
ceec03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
P3F56_06545
DNA repair and recombination proteins [BR:
ceec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
P3F56_06545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
SnoaL
Motif
Other DBs
NCBI-ProteinID:
WGT68489
LinkDB
All DBs
Position
complement(1985680..1985997)
Genome browser
AA seq
105 aa
AA seq
DB search
MANKVTMNKEDLVNMIAAKTRMTKKDTSHILDALTETIMETVASGDKVVLVGFGTFEPRD
RKERKGMNPQTGQSITIPATTVPAFSAGKVFKEQVVNPEKATDLC
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
attgccaataaagtaacgatgaataaagaagatctagtcaacatgatcgctgccaagact
cgcatgaccaaaaaagatacgagtcatattctggatgcgcttacagaaaccattatggaa
accgtcgcttcaggagataaagttgtcttggttgggtttggaacctttgaaccaagagat
cgtaaagaacgtaaaggaatgaatcctcaaactggacaatctattaccattcctgctacc
acagttcctgctttctctgcggggaaagtgtttaaagaacaagttgtcaatcccgaaaaa
gcgactgacctttgctag
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