Cyanobacterium endosymbiont of Epithemia clementina: P3F56_07680
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Entry
P3F56_07680 CDS
T09382
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Pathway
ceec03420
Nucleotide excision repair
ceec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P3F56_07680 (pcrA)
03430 Mismatch repair
P3F56_07680 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceec03400
]
P3F56_07680 (pcrA)
Enzymes [BR:
ceec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P3F56_07680 (pcrA)
DNA repair and recombination proteins [BR:
ceec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P3F56_07680 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
P3F56_07680 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
DEAD
AAA_30
AAA_11
CarD_TRCF_RID
HTH_12
DUF3553
Motif
Other DBs
NCBI-ProteinID:
WGT67105
LinkDB
All DBs
Position
complement(2293384..2295714)
Genome browser
AA seq
776 aa
AA seq
DB search
MTVNNDFLDQLNTSQRLAVEHFCGPLLVAAGAGSGKTRALTYRIAHLISHYHVEPDSILA
VTFTNKAAREMKERIERLFAQEMAIKNYGRRFAILSEHEQKKLISRVYKTTTKKIWLGTF
HSLCAKILRFDINKYQDERGRKWQQNFSIFDESDVQSLIKNIVTKQLNLDDKKFEPRSIR
YHISNLKNLGLSPDKYLQQDSSYKNRVIAEVYNEYQLQLATNNALDFDDLILVPVRLFQQ
NESILGYWHNQFKHILVDEYQDTNQIQYELISLLTTNGETRKSEWNWQNRSIFVVGDADQ
SIYSFRMADFTILLNFQSDFGDGLPDEDTRTMIKLEENYRSSQNILQAANYLIENNTQRI
DKILKATRGLGEYIYCYKADNEQIESKLVIDKIQNLLEENPELNWGNFAILYRINAQSRP
FEDCLIHNNIPYKIVGGFKFYDRQEIKDALAYLRLIANPADTVSLLRIINTPRRGIGKTS
IESLVKAAQALEIPLWEIISDTTSVNTLGGRAAKSINNFSKMIKYFQEKITSLSGAEIFD
QVMQVSGYIDNLKQKGTEETNNRLENISELYNAILQFQEDEEDINLEGFLSNVSLSSDLN
DLKEEQEKVSLMTLHSAKGLEFPVVFLVGLEQGLLPHVRSLNDPLSLEEERRLCYVGLTR
AQEQLFLTYARERFVWGSKETKIPSQFLKELPSDLIKSNLSKTFKYYHQSNTFQAKTIQI
YNQQWSVGDRLIHPNFGIGEVTHILGSGQKMNLAIKFSELGQKIVNPRVTSMEKID
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgactgttaataatgactttcttgatcaacttaatacctcacaacgtctagctgttgaa
catttttgcggacctttattagtggcagctggtgctggttcaggcaaaaccagagccctt
acatatagaattgcccatctgattagtcattatcatgttgaaccagactccattctagct
gttacctttacgaataaagcggctagagaaatgaaagaacgaattgagagactatttgct
caggagatggctattaaaaattatggacgacggtttgctattctttctgaacatgaacag
aaaaaactcatttcacgggtttataaaacaactactaaaaagatttggcttggaactttt
catagtttatgtgcaaaaatattgcgctttgatatcaataaatatcaagatgaacgggga
cgaaaatggcagcaaaatttctcaatttttgatgaatcagatgtacaaagtctaatcaaa
aatattgtgactaagcaattgaatttagatgacaaaaaatttgagcctcgctcaatacgc
tatcatattagtaatttaaaaaatctaggattatctcctgataaatatcttcaacaagac
tcttcttataaaaatcgtgttattgccgaagtttataatgagtatcaattacaattagcg
actaataatgccttagactttgatgatttgattctagttcccgttagactatttcagcaa
aatgaatctatccttggctattggcataaccaatttaaacatattttagttgatgaatat
caagatactaatcaaattcaatatgaattaattagtttattaacaactaatggggaaacc
agaaaaagtgaatggaattggcaaaatcgttctatttttgttgtaggtgatgctgatcaa
tctatttacagctttcgcatggcagactttaccattttgttgaattttcaatcagatttt
ggagatggtttacccgatgaagacacccgtacaatgattaaattagaggaaaattatcgc
tcaagtcaaaatattttgcaagcagctaattatttaattgaaaataacacccaacgcatt
gataaaattttgaaagccacacgaggattgggagaatatatttattgctataaagcagat
aatgaacaaatagaatcaaaactggtaattgataagatacaaaatttactagaagaaaat
cctgaactaaattggggaaactttgcaattctttatagaattaatgctcaatctcgtcct
tttgaagattgtttaattcataataatattccctataaaattgtaggaggatttaaattt
tatgatcgccaagaaattaaagatgctttggcttatctgcgcctaattgctaatcctgca
gataccgttagtttactaagaattattaatacaccccgtcggggaattggcaaaacttct
atagagtctttagttaaagcagcccaagcattagaaatccctctttgggaaattatttcc
gatacgacttccgttaatactctaggaggaagagcagcaaaatcaatcaacaatttttct
aaaatgattaaatattttcaagaaaaaatcactagcttatcaggggcagaaatttttgat
caagtaatgcaagtttctggctatattgacaatttaaaacagaaaggaactgaggaaact
aataatcgcttagaaaatatttctgagttatataatgctattctacaatttcaagaagat
gaagaagacattaatttagaaggatttttatctaatgtttccctctcgtctgatcttaat
gatttaaaagaagaacaagagaaggtatctttaatgacccttcattcagctaagggattg
gaatttcctgtagtatttttagttgggttagaacaaggattgttacctcatgtccgtagt
ttaaatgatcccctgtccttagaagaagaacgtcgtttgtgttatgttggattgactcgt
gcccaggaacaattatttctaacctatgctcgagaacggtttgtttggggatcaaaagaa
actaaaatcccatcacaatttttaaaagagttaccttcagatttaattaaaagtaatctt
tcaaaaacttttaaatattatcatcaatccaatacatttcaagctaaaactattcagata
tataatcaacaatggtcagtgggagatcgtctgattcatcccaattttggaatcggagaa
gtgactcatattttaggatcaggacaaaaaatgaacttagccattaaattttcagaactt
ggacaaaaaatcgttaatcctagagtgacgtcaatggaaaaaattgattaa
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integrated database retrieval system
