Cyanobacterium endosymbiont of Epithemia clementina: P3F56_08065
Help
Entry
P3F56_08065 CDS
T09382
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Pathway
ceec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P3F56_08065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceec03400
]
P3F56_08065
Enzymes [BR:
ceec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
P3F56_08065
DNA repair and recombination proteins [BR:
ceec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P3F56_08065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WGT67165
LinkDB
All DBs
Position
complement(2404789..2405466)
Genome browser
AA seq
225 aa
AA seq
DB search
MSDIETLIIQIHQEAKRKPFPIDISVYEAADKDPTQPILYAGNLKSQICFFGRDLGRDEV
HTGQPLIGAAGTLVRKGFYAAIHHQQAKTQQELQSVCARVLLTNTVPYKPPGNKAYITEV
KNRFRPFIEKLLVIHWQGNQIITLGTEAFKWFIPYGDKGEVNEFFQRNDRYENKLPVTLH
ATDTLGIQHQRQVTLLPLPHPSPLNQKYYAKFPQMLQKRLNEFDF
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattgaaaccttgatcatccagattcatcaagaagctaaacgaaaaccattt
cccattgatatctccgtttatgaagcggctgataaagatcccactcaacctattttgtat
gcgggaaacctcaaaagtcagatctgcttttttggacgggatcttggacgagatgaagtc
cacacaggacaacctttaattggtgccgcaggcactttagttcgtaaagggttttacgcg
gcgatacatcatcaacaggcgaaaactcaacaagagttgcaaagcgtctgcgctcgcgtt
cttctcaccaatactgtcccctataaaccacctggcaataaagcttatattactgaagtt
aaaaatcgtttccgtccctttatcgaaaaattattagtcattcattggcaaggaaatcaa
attattactttaggaaccgaggcgtttaagtggttcattccttatggagataaaggggaa
gtcaatgaatttttccaacggaacgatcgctatgaaaataaattacctgtcactctccac
gcgaccgatactttgggaatacaacaccaacgacaagttactttactccctttaccccat
ccatctcctctcaatcagaaatattatgccaaatttccccaaatgttacagaagaggctg
aatgaatttgacttttaa
DBGET
integrated database retrieval system
