Cyanobacterium endosymbiont of Epithemia clementina: P3F56_08960
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Entry
P3F56_08960 CDS
T09382
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Pathway
ceec00470
D-Amino acid metabolism
ceec00550
Peptidoglycan biosynthesis
ceec01100
Metabolic pathways
ceec01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P3F56_08960
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
P3F56_08960
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
P3F56_08960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ceec01011
]
P3F56_08960
Enzymes [BR:
ceec01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
P3F56_08960
Peptidoglycan biosynthesis and degradation proteins [BR:
ceec01011
]
Precursor biosynthesis
Amino acid ligase
P3F56_08960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
WGT67320
LinkDB
All DBs
Position
2675529..2676584
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AA seq
351 aa
AA seq
DB search
MIKLRVGLLFGGRSGEHEVSIKSAKAIATALNTTENSRKYEVLPVYIQKNGVWQAGNTAQ
QILDQETLLPCKDATTQQLWQFPPQVSEVDVWFPILHGPNGEDGTIQGLLSLMQTPFVGS
GVLGSSVGMDKIAMKMIFAQVGLPQVEYIAVDRAKIWSNSFVFSEFCDKIEKNITYPCFV
KPANLGSSVGIAKVRSRSELKVALDDAASYDRRIVIETGVIAREVECAVFGNENPKASVI
GEITYNTDFYDYETKYTSGKAQLCIPAQLPDPIITQIQEMAVLAFTALDGAGLARVDFFY
VEDSQEVFVNEINTLPGFTIFSMYPRLWKATGVSFSELVDQLIQLALERNN
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgattaaattacgagtagggttattgtttgggggacgatcaggagaacatgaagtttct
atcaagtctgcaaaggcaatcgcaactgccttaaacaccacagaaaactcccgaaaatac
gaggtattaccggtatatattcaaaaaaatggagtttggcaagcaggaaataccgcacaa
cagatactcgatcaagaaactctcttaccctgtaaagatgcaactacacaacaattatgg
cagtttccccctcaagtaagtgaagtagatgtttggtttcccattcttcacggaccaaat
ggagaagacgggacgatacaaggattgttaagcttaatgcagactccttttgtaggaagt
ggggttttaggatcatccgtaggcatggataagattgccatgaaaatgatctttgctcag
gtaggattaccccaagttgaatatattgcagtagatagagctaaaatatggtctaattca
tttgttttttcagaattttgcgataaaattgaaaaaaatataacttatccttgttttgtg
aagcctgctaatttagggtcatctgtaggaattgctaaggtgcgatcacgttcagaactt
aaagtagctttggatgatgcagcaagttacgacagacggattgtcattgaaacaggagta
atcgctagagaagttgaatgtgcagtttttggtaatgaaaaccctaaggcgtcggtgatt
ggggaaattacttataatactgatttttacgattatgagacaaaatatacaagtggcaaa
gcgcaattatgtattcctgctcaacttcctgatcccattattactcaaattcaagaaatg
gctgtccttgcgtttactgcattagatggggcagggctagctcgggtagactttttctat
gtagaagatagccaagaagtgtttgtcaatgaaattaacacccttccagggtttactatt
ttcagtatgtatccccgactgtggaaagcaacaggagtttctttctctgaattagtcgat
caattgattcaattagcattggaaagaaataattga
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