Cyanobacterium endosymbiont of Epithemia clementina: P3F56_09720
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Entry
P3F56_09720 CDS
T09382
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceec03400
]
P3F56_09720 (sbcC)
DNA repair and recombination proteins [BR:
ceec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P3F56_09720 (sbcC)
Archaeal homologous recombinant proteins
P3F56_09720 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
SbcC_Walker_B
AAA_29
Rad50_zn_hook
AAA_27
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WGT67451
LinkDB
All DBs
Position
2901112..2904138
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPLELSLKNFLSYREATLNFRGLHTACICGANGAGKSSLLEAITWVIWGKSRAVVDDDV
IYTGCNYVRVDFQFISNQEVYRIIRNRHRGRSSHLEFQIESSGEFRSLTSKGIRATQEKI
VFSLKLDYETFINSAYLRQGRADEFMLRRPIERKQILADLLKLGQYQELSNRAKDLSKQY
QGQAQHIELSLVPIKEKLEKKKDIQGQQLTLSERIQKLQLNQEKQKNQLQQLQREEQQRK
TWYNQLDWQEQQYKKLEKDKQRLQKEKNEINQQLHRLIIITNQEDNILKGCQKLLELQKE
EKSLSLKFKVHQDNTKRQQLLTQKLNKKHNVIELQIHQAKTQLDILEREEKELQYILKNS
DEVKTALQHLSNHRRHLYELDKLQHKVTPIQQKYYNIHSEIEQVKANLKAQLEQLYIAET
DCLEQLEKMPKIRESVSDLDTKIQNLDNKKNYQKRVEEKGQKQKEYQKILKENQRHFEEK
IEELKQKLQKLNVPNSICPLCEQPLNDTHLNQIFRKTQLQEQEIKDKIWMLQEQISLVEK
ELKILRIEYTQLNKDLADYPSLQKKIGQLEAQLETFEKVNFKLKQVREKIQKIEQKLTEN
SYCIDLQSELNTLNQELKHLNYDEQTHALVRGEVERLRKVEIRQAKLEDANRRQSIISQQ
KPQLIQKISALKQEIKNLHQTSKIKQELEEIEQSIQNLGYQNSNHQELLKSLRESQSWEL
KFQELQQAKQQYPELQKRLEIVEIRLNDNLTEQNKIKQEIDILSFKIKSTMDQREIITVL
EKSIQIQRQKLDELLANQGRLEQSISQLESVKQQFTDDKKQLKDIYRKYRVYTELAQAFG
KNGIQALMIENILPQLEAETNQILARLTDNQLHIQFFTQRKGRSGSSRKKTTKVIDTLDI
LISDSQGTRSYETYSGGEAFRINFSIRLALAKLLAQQAGTSLQMLIVDEGFGTQDAQGCE
QLVAAINAIASDFSCILSVTHMPRFKEAFQCRIEVYKDNQGSQLELVS
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattcccctcgaacttagcctgaaaaactttcttagctatcgagaagcaaccctaaat
tttagagggttacatacagcctgtatctgtggtgcaaatggtgcaggaaaatcatcttta
ctcgaagcaattacctgggtgatttggggtaaaagtcgcgccgtagttgatgatgatgtt
atttatacaggatgtaactatgtgcgagttgattttcaatttattagtaatcaagaagtt
tatcgaatcatccgtaatcgtcatcgaggacgtagtagtcatctagaatttcaaatagaa
agttcaggagaatttcgttcattgactagcaaaggaatacgagctactcaagaaaaaata
gttttctccttaaaactggattatgaaacgtttattaattcagcatatttacgtcaagga
agagctgatgaatttatgctacgtcgcccaatagaacgaaaacaaatattagcagattta
ttaaagcttggacagtatcaagaattatctaatcgagctaaggatttatctaaacaatat
caaggacaagctcaacacattgaattaagtctagtacctataaaagaaaaattagaaaag
aaaaaagatattcaaggacaacagttaactctatccgaacggatacaaaaacttcaactt
aatcaagaaaagcaaaaaaatcaactccagcaacttcaacgagaagaacagcagagaaaa
acttggtataaccaattagattggcaagaacaacaatataaaaaactagaaaaagacaaa
caaagattacaaaaggaaaagaacgaaattaatcaacagctgcatcgtcttataataatt
acaaatcaagaagataatattcttaaaggttgccagaaattattagaattacaaaaggaa
gaaaaaagcttatctcttaagtttaaagttcatcaagataatactaaaagacaacaatta
ttaacccaaaagctaaataaaaaacataatgtaattgagttacaaattcatcaagctaaa
actcagttagatatattagagcgagaagaaaaagaactgcagtatattcttaagaattcc
gatgaagtcaaaactgctttgcaacatctatctaatcatcgtagacacttatacgaatta
gataagttacagcataaagttacaccaattcaacaaaaatactacaatatacactctgaa
attgaacaagttaaggctaatttaaaagcccagctagaacagctttatattgctgaaact
gattgtttggaacaactagaaaaaatgccaaaaatacgggaatctgtatcagatcttgat
actaaaatacaaaatcttgacaataaaaaaaattatcaaaaacgagtggaagaaaaaggt
caaaaacaaaaagagtatcaaaaaatactcaaagaaaatcagcgacactttgaagaaaaa
attgaagaattaaaacaaaaactacaaaaactaaacgttccaaattcaatttgccctcta
tgtgaacagccattaaatgacactcatcttaatcaaatttttagaaaaactcagttgcag
gaacaagaaattaaagataaaatttggatgttacaagaacagatatctcttgtagaaaaa
gaattgaaaatactaagaatagaatatactcaattaaataaagacttagctgattatcct
tcattacagaaaaaaattggacaattagaagcacaactagaaacttttgaaaaagttaat
tttaaacttaaacaagttagagaaaaaattcaaaaaattgaacaaaaattgactgaaaat
agctattgtatagatttacaatctgaacttaatactctaaatcaagaactaaaacatctc
aattatgacgagcaaacccatgctttagttagaggagaagtcgaacgattgcgtaaagta
gaaattagacaagctaaactagaagatgcgaatcgccgtcagtcaattatttcacaacaa
aaaccccaacttattcaaaaaatatctgctcttaagcaagaaataaaaaacttacatcaa
acctcaaagattaaacaagagcttgaggaaatagaacaatcaattcaaaatttaggctat
caaaattcaaatcaccaggaattactaaagtctcttcgtgagtcccagtcttgggaacta
aaatttcaagaattgcaacaagcaaaacaacaatatcccgaattacaaaaacggttagaa
attgtagaaatacgactaaacgataaccttactgaacaaaataaaattaaacaagaaatt
gatatcttatcttttaagataaaatccacaatggatcaaagagaaataattactgtccta
gaaaaaagcatccaaattcaacgacaaaaattagatgagttgttagcaaaccaaggaaga
ttagaacaatctatttctcaattagaaagtgttaaacaacaatttactgatgataaaaaa
cagcttaaagatatctataggaaatatcgtgtttacacagaattagctcaagcatttggg
aaaaacggcatccaagcattaatgatcgaaaatattttacctcaattagaagctgaaact
aatcaaattcttgctcgcttaacggataatcaacttcatattcaattctttactcaaaga
aaaggacgtagtggtagttctcggaagaaaactacaaaagttattgatactttagatatt
ttaatttctgattctcaaggaactcgttcatatgaaacttattcgggtggggaagcattt
agaattaatttttctattcgtttagctttagcaaagttactagcacaacaggcaggaact
tctttacaaatgctcattgttgatgaaggatttggaacccaagatgctcaaggttgtgag
caattagttgcagcaattaatgctattgcttcagacttttcttgtattttaagtgtcact
catatgccacgattcaaagaagcttttcaatgtcgtattgaagtatataaagacaatcaa
ggatctcaattagagttagttagttga
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