Cyanobacterium endosymbiont of Epithemia clementina: P3F56_09880
Help
Entry
P3F56_09880 CDS
T09382
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ceec
Cyanobacterium endosymbiont of Epithemia clementina
Brite
KEGG Orthology (KO) [BR:
ceec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceec03019
]
P3F56_09880 (rnc)
03009 Ribosome biogenesis [BR:
ceec03009
]
P3F56_09880 (rnc)
03036 Chromosome and associated proteins [BR:
ceec03036
]
P3F56_09880 (rnc)
Enzymes [BR:
ceec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
P3F56_09880 (rnc)
Messenger RNA biogenesis [BR:
ceec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
P3F56_09880 (rnc)
Ribosome biogenesis [BR:
ceec03009
]
Eukaryotic type
90S particles
RNase
P3F56_09880 (rnc)
Prokaryotic type
rRNA processing factors
P3F56_09880 (rnc)
Chromosome and associated proteins [BR:
ceec03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
P3F56_09880 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DUF6877
Motif
Other DBs
NCBI-ProteinID:
WGT67480
LinkDB
All DBs
Position
2948597..2949292
Genome browser
AA seq
231 aa
AA seq
DB search
MTIFLRFKNQALLDCALTHRSYVNEHRDVTEHNERLEFLGDAVLQFVVSEELYRRHPELN
EAQLTRLRSKLVDEPQLAQFAKVLDLGEFMYLGQGAIKDGGQKNPALLSDTFEAIIGAYF
LDAGIEAVQRFVRSLFKDAIDTLIIPESKKVSSKIIDVKNRLQEWALANYKKVPKYFLIE
ELGPDHAKEFIFGVQINKQLLGTGKGRRKQEATKAAAQDALNKLSIFDELR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgactatatttcttcggtttaaaaatcaagcgttgttagactgtgcgttaacccaccgc
tcttacgttaacgaacatcgtgacgttacagagcataatgaacgtttagaatttttgggt
gatgcagtattacaatttgtcgtaagtgaagaactctatcgacgccatcctgaattaaac
gaagcacaattgactcgtttgcggtcaaaattagttgatgaacctcaattagctcaattt
gcaaaggtcttagacttaggagaatttatgtatcttggacaaggggcgatcaaagatggg
ggacagaagaatcccgctttattgagtgatacctttgaagctattataggggcatatttt
ctcgatgcaggaatagaagcggtacagaggtttgtgcgatcactttttaaagatgcaatt
gatactctaataatccctgagtcaaaaaaagtttctagtaaaattattgatgtcaagaat
cgtcttcaagaatgggcattagctaactataaaaaagtccctaaatactttttaattgag
gaattaggtcctgatcatgcaaaagagtttattttcggtgtacagattaataaacaacta
ttagggacgggaaaaggtcgccgtaaacaggaggcgactaaagccgccgcccaagatgct
ttaaataaattatcaatttttgatgagttaagatga
DBGET
integrated database retrieval system
