Corynebacterium efficiens: CE0968
Help
Entry
CE0968 CDS
T00103
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cef
Corynebacterium efficiens
Pathway
cef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE0968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cef03019
]
CE0968
03400 DNA repair and recombination proteins [BR:
cef03400
]
CE0968
Enzymes [BR:
cef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CE0968
Messenger RNA biogenesis [BR:
cef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CE0968
DNA repair and recombination proteins [BR:
cef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CE0968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_Cmi2_C
HEM4
Motif
Other DBs
NCBI-ProteinID:
BAC17778
UniProt:
Q8FQZ9
LinkDB
All DBs
Position
1029392..1031452
Genome browser
AA seq
686 aa
AA seq
DB search
MEGMNATREEANQLLEGIAGPGATLRDDQWVAIDALVNQSRRMLVVQRTGWGKSAVYFIA
AKLLRARGAGAAVIISPLLALMRNQVAAAERAGIRAATLNSANMTDWDQIQAEVTAGAVD
VLLISPERLNNPDFRDAVLPRLAAETGLVVVDEAHCISDWGHDFRPDYRRIRDLLAGLAP
GAPVLATTATANDRVVEDVRAQLGEDTGLLRGGLDRESLHLAVVNIPDSTARPAWLATHL
HQLQGSGIIYCLTVAAAHDLADALTAVGWTVAAYTGRTEAGERERLEQALLNNEIKALVA
TSALGMGFDKPDLGFVVHLGAPGSPVSYYQQIGRAGRGTDRADVILLPGIEDKEIWEYFA
SVSFPKEPVVRQLLSVLTEEPQSTIRLESQVDLSRSRLEQVLKVLDVDGAVRRVRGGWVT
TGAEWIYDAERYRGLEQARTEEQNSMLTYQRTDGCRMLYLRRELDDHTATDPCGRCDNCT
GRYWPTETDSAVTAEVGRQLSAPGIRVQARKQWPTGIAVKGKIRGLNEGRALGRLNDIGR
GPALRELLDSCTFTEDPWMQRIIAVLADWDWATRPVNVAALGQVDEKRTALTQQVAEAIA
RVGRMNYAGVLPVAPGAVEVTAQNSAYRVAALLDHWDYSQGLNLVDGPVLLVTDLIDTGW
SVTVAGSGIAERSGQDVLPFALASRG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggagggcatgaacgcaacgagagaagaagccaaccagctcctggagggtatcgccgga
ccaggggccaccctccgcgatgaccagtgggtggctattgatgccctggtcaaccagagc
agacgcatgctggtggtccagcgcaccggatggggtaaatccgcggtctacttcatcgcc
gccaagctgctgcgcgcccggggagccggggccgcggtgatcatctcgccgctgttggcg
ctgatgcgtaaccaggtcgcggcggcggaacgcgccgggatccgggcggccaccctcaac
agcgcgaatatgaccgactgggatcagatccaggcggaggtgaccgcaggcgcagtcgat
gtgctgctcatctccccggaacgcctcaacaaccccgatttccgggatgctgtcctgccc
cgcctggctgcggagaccgggctggtggtggtggatgaggcgcactgtatctccgactgg
ggtcatgatttccgccccgattaccgtcgcatccgtgacctgttggcgggcctggcaccg
ggggcgccggtgctggcaacaaccgccaccgccaatgaccgcgtggtggaggatgtccgg
gcacagctcggggaggataccggtctgctgcgtggtggactggaccgggaatcactccac
ctcgcggtggtgaacatcccggattccacagcacgaccggcgtggctggccacccacctc
caccagctccagggctccggcatcatctactgtctgacggtggctgccgcccatgacctg
gctgatgcactcaccgcggtgggctggaccgtggccgcctacaccggccggaccgaggcc
ggggaacgcgaacgcctggaacaagccctgctcaacaatgagatcaaggcactggtggcc
acctccgcactcggcatgggttttgacaaacctgacctcggattcgtggtccacctgggc
gcacccggttccccggtgtcctactaccagcagatcggccgcgccggccgtggcaccgat
cgcgccgatgtcatcctcctgcccggcatcgaagacaaggagatctgggagtatttcgcc
tccgtgtccttccctaaagaacctgtggtccgccagctgctcagtgtcctcaccgaggag
ccgcagtccaccatcagattggaatcccaggtggatctctcccggtcgcgcctggaacag
gtactcaaggtgcttgacgtggacggcgcggtccgtcgcgtgcgtggtggctgggtcacc
accggggctgagtggatctacgatgccgagcgctaccgcggtctggaacaggcccgcaca
gaggaacagaacagcatgctcacctaccagcgcaccgacgggtgccggatgctctatctg
cgccgtgaactggatgaccacaccgccaccgatccctgcggacgttgcgacaactgcacc
ggaaggtactggcccaccgagaccgacagtgccgtcaccgccgaggtgggcaggcagctc
agcgcgccgggtatccgggtgcaggccaggaaacagtggcccaccggcatcgccgtgaag
gggaagatcaggggtctcaacgagggccgtgcactggggcgcctcaacgacatcggccgt
ggcccggccctgcgggagttgctggactcatgcaccttcaccgaggatccctggatgcag
cggatcatcgcggtgctggcggactgggactgggccacccgcccggtcaatgtcgcagcg
ctggggcaggtggatgagaaaaggaccgccctgactcagcaggtggcggaagccatcgcc
cgggtggggcggatgaactacgccggggtgctcccggtggcgccgggggcggtggaggtg
actgcgcagaactccgcctaccgggtggcggcactgctggatcactgggattactcccag
ggtctgaacctggtggacggtccggtgctcctggttaccgatctcatcgacaccggatgg
tcggtgaccgtggctggaagcggcatcgcggaacgctccgggcaggacgtcctgccgttc
gcgctggctagtcggggataa
DBGET
integrated database retrieval system
