Corynebacterium efficiens: CE1303
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Entry
CE1303 CDS
T00103
Name
(GenBank) putative transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cef
Corynebacterium efficiens
Pathway
cef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE1303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cef03021
]
CE1303
03019 Messenger RNA biogenesis [BR:
cef03019
]
CE1303
Transcription machinery [BR:
cef03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CE1303
Messenger RNA biogenesis [BR:
cef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CE1303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
BAC18113
UniProt:
Q8FQ32
LinkDB
All DBs
Position
1368104..1370443
Genome browser
AA seq
779 aa
AA seq
DB search
MCRHSGFLPAGCHADRRSAVGLWVVNLNYTEEAFQPSRMPCRPMGHNTAIWLECNERISV
TDTDNTAANQGDLTALRLPELRKIAGELGLRGVSALRKGDLINAIATARSGGSPAQPTQQ
AGPAKDAPAAPATRTRRATRTSAPEKGAEAAEAPAPDAPVQEAQETQEAPARRGRRRVTA
SPSSTQSSTQEETGTTQDTPTQDTPTQDTPTQDTPAQEAPAQQDGQSASDGDDQDNRMES
RSAARRARRNRQRQSQRDTQDSAHGEQSQDETTDAPAERSERSDQTQSDDNQSDSQDRHR
GNQRRDRRGNRSDNQQDQGDNQSDSRDNSQNNRQGNRDSDDHGDDRRGRRGRRNRRGRDR
SDNRDNRDNRNENQQDQGDNQNDDQLQNVAGILDIVDTNVAFVRTTGYHPAPSDVFVNNQ
LIRRMGLRSGDAIVGQVRMNQGGNQGGRQGGHGGRNRQKYNNLVRVETINGLPVEEARNR
PEFNKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIAN
AIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTAVAELAIERAKRL
VEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSL
TIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLN
PDEARIMHKLRRILSALDNQQAIDLLIKQLKKTKSNAEFLMQVASSAPMAGSENDEEYS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtcgacattccgggtttctgcccgctgggtgtcatgctgatcgacgttctgccgtg
gggttgtgggtggtcaacctcaattacacagaagaagcttttcagccttcgcgaatgcca
tgtaggcccatgggacacaacaccgccatttggttggaatgcaacgaaaggatatctgtg
accgacacagacaacaccgcagcgaaccagggcgatctgaccgcccttcgactgccggaa
ctgcgcaagatcgccggtgaactcggactcaggggagtttccgcgctgcgtaagggtgat
ttgatcaacgccatcgccaccgcccgttcgggtggatcacctgcccaaccgacccagcag
gctgggccagccaaggatgccccggccgctcccgcgacccgcacccgccgggccaccagg
acctccgcgcctgagaagggtgcggaagccgccgaagccccagcacctgacgccccggtg
caggaagcacaggagacccaggaggctcccgcccgtcggggtcgtcgtcgggtgaccgca
tcgccgtcgagcacccagtcgagcacccaggaggagacgggcaccacccaggacaccccc
acccaggacacccccacccaggacacccccacccaggacaccccagcacaggaggcaccc
gcccagcaggatggtcagtccgcctccgatggggatgaccaggacaaccgcatggagtcc
cgctccgctgcccgtcgcgcacgccgcaaccgtcagcgccagagccagcgggacacccag
gattccgcccacggggagcagtcccaggatgagaccacggatgccccggcagagcgttca
gagcgttcagaccagacccagtccgatgacaaccagtcggattcccaggaccgccaccgc
ggcaaccagcgtcgtgaccgccgcggtaaccgcagcgacaaccagcaggaccagggtgac
aaccagtcggactcccgggacaacagccagaacaaccgtcagggcaaccgcgactccgat
gaccacggtgatgaccgccgtggccgcaggggacgtcgcaaccgcaggggacgcgaccgc
agcgacaaccgcgacaaccgcgacaaccggaatgaaaaccagcaggaccagggcgataac
cagaacgacgaccagctgcagaacgtcgccggcatcctcgacatcgtggacaccaatgtc
gccttcgtgcgcaccaccgggtaccacccggcgccgtccgatgtctttgtcaacaaccag
ctgatccgccgcatgggtctgcgctccggtgacgcgatcgtcggccaggtgcgcatgaac
cagggcggcaaccagggtggtcgtcaaggtggccacggtggacgcaaccgccagaagtac
aacaacctcgtccgcgtggagaccatcaacggtctgcccgttgaggaggcacgtaaccgc
cccgagttcaacaagctcaccccgctgtacccgaaccagcgtctgcgtctggagaccgag
ccgaagatcctgaccacccgtgtcatcgatctgatcatgccgatcggtaaggggcagcgt
gccctgatcgtgtccccgccgaaggccggtaagaccaccatcctgcagaacatcgcgaat
gcgatcgccaccaacaacccggagtgctacctcatggtcgtgctggtcgatgagcgcccc
gaggaggtcaccgacatgcagcgttcggtcaagggtgaggtcatcgcctccaccttcgac
cgcccgccatcagagcacaccgctgttgcagagctggccatcgagcgcgccaagcgactg
gtggagcagggccaggacgtggtggtcctgctggattccatcacccgcctgggccgtgcg
tacaacaacagctccccggcatcgggacgcattctgtccggtggtgtcgactccaacgcg
ctgtacccaccgaagcgtttcctgggtgccgcccgcaacatcgagaacggtggttccctg
accatcatcgccaccgcgatggtggagaccggttccgccggtgacaccgtgatcttcgag
gagttcaagggcaccggcaacgcggagctcaagctggaccgtaagatctccgagcgtcgg
gtgttcccggctgtggatgtcaacccgtccggcacccgcaaggatgagttgctgctcaac
ccggatgaggcacgcatcatgcacaagctgcgtcgcatcctgtccgccctggacaaccag
caggccatcgatctgctcatcaagcagctgaagaagacgaaatccaacgcggaattcctc
atgcaggtcgcctccagcgccccgatggcaggatccgagaatgatgaggagtactcctga
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