Corynebacterium efficiens: CE1507
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Entry
CE1507 CDS
T00103
Name
(GenBank) putative excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cef
Corynebacterium efficiens
Pathway
cef03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CE1507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cef03400
]
CE1507
DNA repair and recombination proteins [BR:
cef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CE1507
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CE1507
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
AAA_21
APS_kinase
AAA_23
nSTAND3
nSTAND1
nSTAND_NTPase5
AAA_22
AAA_33
AAA_25
AAA_18
NACHT
DnaJ_CXXCXGXG
MMR_HSR1
Viral_helicase1
cobW
AAA_14
NB-ARC
RNA_helicase
SLFN-g3_helicase
NTPase_1
Zn_ribbon_Nudix
MeaB
CCDC24
T2SSE
Septin
MobB
ScfRs
Motif
Other DBs
NCBI-ProteinID:
BAC18315
UniProt:
Q8FTQ6
LinkDB
All DBs
Position
1572310..1575174
Genome browser
AA seq
954 aa
AA seq
DB search
MADRLVVRGAREHNLKGVDIDLPRDSMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVDLIDGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLFSRAGTAY
CPECGAPVQRQTPQDMVDQILEMEEGLKFQLLAPVVRTRKGEFVDLFADLASQGYSRVRV
DGQVYQLSEPPTLEKQIKHDIDVVVDRLQVKASQKQRLTDSLETALRLADGVVVLEFVDL
DEDDPNRLRRFSEKMSCPNGHTLAIDELEPRAFSFNSPYGACPACDGLGVRTEVDIDLIV
PDPEAPAVKSIQPWNSSPNSKYFEKLIEGLAAALDFDPQTPYNKLTAAQRKALIHGSKQE
VSVRYKNRYGRVRAWTAPFEGVMGYFDRKLEQTDSESQKDRLLGYTREVACPTCQGARLK
PEILAVRLDSESHGQLSIAGLTALSVTEAFEFLNSLTLGKREEMIAGAVLKEIRARLKFL
LDVGLSYLTLNRAAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNQQLIRT
LEHLRDIGNTLIVVEHDEDTIRRADYLVDIGPRAGEYGGEVVYQGEPKGILECEDSITGA
YLSGRRTLGVPDTRREIDPDRKLKIVGARENNLQNVDVEIPLGVLVCITGVSGSGKSTLI
NQILAKVLANQLNRARQVPGRAKRVEGVEHLDKLVQVDQSPIGRTPRSNPATYTGVFDKV
RNLFAETTEAKVRGYKPGRFSFNIKGGRCEACQGDGTLKIEMNFLPDVYVPCEVCEGKRY
NRETLEVHYKGKNIAEVLDMPISEAAEFFEPIKSIHRYLATLVDVGLGYVRLGQAATTLS
GGEAQRVKLASELQKRSNGRTVYILDEPTTGLHFEDIRKLMMVIQGLVDKGNSVIVIEHN
LDVIKAADWIVDMGPEGGSGGGTVVAEGTPEQVAEVEGSYTGQFLKEMLQPVSS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatcgcctcgtagtgcgcggtgcgcgcgaacacaacctcaagggcgtggacatt
gacctgccacgggattcgatggtggtgttcaccggcctctccggttccggaaagtcctcc
ctggcctttgacaccatcttcgccgagggccagcgcaggtatgtggagtccctgtccagc
tatgcccgcatgttcctagggcagatggacaagcccgatgtggacctgatcgatggtctc
tcccccgcggtgtccatcgaccagaaatccaccaaccgcaacccacggtccacggtgggc
acgatcaccgaggtctatgactacctgcgcctgttgttctcccgcgcgggtaccgcctac
tgcccggaatgtggcgcgcccgtgcagcgccagaccccgcaggacatggtggatcagatc
ctggagatggaggaggggctgaaattccagctcctggccccggtggtgcgcacccgcaag
ggtgagttcgtcgacctcttcgccgacctcgcgtcccaggggtactcccgtgtgcgtgtc
gacggtcaggtgtaccagctcagcgagcccccgacgctggagaaacagatcaagcacgac
atcgacgtggtggtcgaccgcctccaggtcaaggccagccagaagcagcgcctcaccgac
tccctcgagaccgccctgcggcttgccgacggcgtggtggtcctcgagttcgtcgacctg
gacgaggacgacccgaaccgtctgcgtcgtttctccgagaagatgagctgccccaacggc
cacaccctggccatcgatgagctcgaaccccgcgcgttctccttcaactccccctatggt
gcctgcccggcctgcgacggcctgggtgtgcgcaccgaggtggacatcgatctcatcgtg
cccgacccggaggcccccgcggtcaagtcgatccagccgtggaactccagccccaactcc
aagtacttcgagaagctcatcgagggtctggccgcggcactggacttcgacccccagacc
ccctacaacaagctcaccgccgcccagcgcaaggccctgatccacggctccaagcaggag
gtcagcgtccgctacaagaaccgttacggacgcgtccgcgcctggactgcccccttcgag
ggtgtcatggggtatttcgaccgcaagctggagcagaccgactccgaatcccagaaggac
cgtctgctcggttacacccgcgaggtggcctgcccgacctgtcagggcgcacgcctgaag
ccggagatcctcgccgtgcggctggattccgagtcccacggccagctgtccattgccggg
ctgaccgccctgtcggtcaccgaggccttcgaattcctcaacagcctgaccctgggcaaa
cgcgaggagatgatcgcgggtgcggtgctcaaggagatccgcgcgcgcctgaagttcctg
ctcgatgtgggcctgtcctacctcaccctcaaccgcgcggccggcaccctgtccggtggt
gaggcccagcgcatccgcctggccacccagatcggttccggcctggccggcgtgctctat
gtcctcgatgagccgtccatcggcctgcaccagcgtgacaaccagcagctgatcaggacc
ctggaacacctccgtgatatcggaaacaccctcatcgtggtcgagcatgatgaggacacc
atccggcgcgccgactacctcgtcgacatcggcccccgcgccggtgaatacggtggcgag
gtggtctatcagggtgagccgaagggcatcctcgagtgtgaggactccatcaccggtgcc
tacctgtccggtcgtcgcaccctgggtgtgcccgacacccgccgggagatcgacccggac
cgcaaactgaagatcgtcggtgcgcgggagaacaacctccagaacgtcgatgtggagatc
cccctcggtgtcctggtgtgcatcacgggtgtctccggttccggcaagtccaccctgatc
aaccagatcctggcgaaggtgctggccaatcagctcaaccgtgcccgccaggtaccggga
cgcgccaaacgggtcgagggagtggagcacctggacaagctcgtgcaggtggaccagtca
ccgatcggccggaccccgcgctccaacccggcgacctacaccggtgtcttcgacaaggtg
cgtaacctcttcgccgagaccaccgaggcgaaggtccgtggctacaagccgggacgcttc
tccttcaacatcaagggtggccggtgcgaggcctgccagggtgatggcaccctgaagatc
gagatgaacttcctgcccgatgtgtacgtcccgtgtgaggtctgcgagggcaaacgctac
aaccgtgaaaccctcgaggtgcactacaaaggcaagaacatcgccgaggtcctcgacatg
ccgatctccgaggcggcggagttcttcgaaccgatcaagtccatccaccgctaccttgcc
accctggttgatgtgggactgggatatgtccgtctcggccaggccgcgaccacgctgtcc
ggtggtgaggcacagcgcgtgaaactggcctccgagctgcagaagcgctccaacggccgc
accgtctacatcctggatgagccgaccaccggcctgcacttcgaggacatccgcaaactg
atgatggtgatccaggggctggtggacaagggcaactccgtgatcgtcatcgagcacaac
ctcgatgtgatcaaggccgccgactggatcgtggacatggggcccgagggcggttccggt
ggtggcacagtcgtggccgagggcacgcccgagcaggtcgccgaggtggaaggttcctac
acgggtcagttcctcaaggagatgctccagccggttagctcttag
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