Corynebacterium efficiens: CE1872
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Entry
CE1872 CDS
T00103
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cef
Corynebacterium efficiens
Brite
KEGG Orthology (KO) [BR:
cef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cef03016
]
CE1872
Enzymes [BR:
cef01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CE1872
Transfer RNA biogenesis [BR:
cef03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CE1872
Prokaryotic type
CE1872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
YDG
BACON
Motif
Other DBs
NCBI-ProteinID:
BAC18682
UniProt:
Q8FPB3
LinkDB
All DBs
Position
1977299..1978282
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AA seq
327 aa
AA seq
DB search
MTTEPSRSAGTSFKPRQISTATGYGIDFSGMNDPVQNSGLVVVDKPAGMTSHDVVSKLRR
AFSTRKVGHAGTLDPMATGVLVVGIERGTRFLAHLVATTKAYDATIRLGASTTTDDREGD
VVFSADASTLDDEQITTAVTSLTGEIMQKPASVSAIKIDGKRAHERVRDGEVVDIPARPV
TVSVFDVLEQRREGGFVDLDVRVHCSSGTYIRSLARDLGAALGVGGHLTALRRTEVGPFT
LEDAIPLADLQDNARLSLSLDEALARSYPVLEITEAEGEALSMGKWLEPRGLKGVHAAVT
PSGRSIALVEEKGKRLATVFVARPNTL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccgaaccctcaaggtccgccggaacttcctttaaaccgcgccaaatatccacg
gctacaggttacggcatagacttctcaggcatgaatgatcccgtccagaactcaggtctc
gtcgtggtggacaaacccgccggaatgacatcacacgatgtggtatcaaaactgcgccgt
gccttctccacccgcaaggtggggcacgccggcacccttgatcccatggccaccggtgtg
ctggtggtcggcatcgagcgtggtacacgtttcctcgcgcacctggtggccaccaccaag
gcctacgatgccaccatccggctcggcgcctccaccaccaccgatgaccgggagggggac
gttgtattctcggctgacgcctcgacgcttgacgacgaacagatcaccaccgccgtcacc
tcgctgaccggggagatcatgcagaaacccgcgagtgtgtccgccatcaagatcgacggg
aagcgggcccatgaacgggtccgcgacggtgaggtggtggatattccggcgcgcccggta
accgtgagcgtgttcgacgtgctggagcagcgacgcgagggtggcttcgtggatctggat
gtgcgggtgcactgttcctccggcacctatatccgttccctggcgcgtgacctgggggcc
gccctgggggtgggtggacacctgaccgcgctgcgtcgcaccgaggtggggcccttcacc
ctggaggatgcgatccccctggctgacctccaggacaacgcccggttatccctgagcctg
gatgaggcactggcccgttcctatcctgtcctggagatcaccgaggccgagggtgaggca
ctgtcgatgggcaagtggctggaaccgcgtggactgaagggtgtgcacgcggcggtcacc
ccgtcgggccggtcgatcgccctggtcgaggagaaggggaaacgcctggccaccgtgttc
gtagcgcgtcccaacaccctgtga
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