Corynebacterium efficiens: CE1880
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Entry
CE1880 CDS
T00103
Name
(GenBank) putative transcriptional termination/antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
cef
Corynebacterium efficiens
Brite
KEGG Orthology (KO) [BR:
cef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cef03021
]
CE1880
03009 Ribosome biogenesis [BR:
cef03009
]
CE1880
Transcription machinery [BR:
cef03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CE1880
Ribosome biogenesis [BR:
cef03009
]
Prokaryotic type
rRNA transcription factors
CE1880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
KH_NusA_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
BAC18690
UniProt:
Q8FPA5
LinkDB
All DBs
Position
complement(1986601..1987680)
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AA seq
359 aa
AA seq
DB search
MISRDAHSTKPWKKQTTRIHGTLRGRQVNIDVQALRAIEKEKGIRVEDMIRTIANALLHS
YLDNRESDVPESSKARVDIDVSTGAVAVIVTEFDDEGTISSEYDDTPSNFGRVSARAVRD
AIVRRLREAEAERAFDAYAEYEGTVMSGLVQADSRAAERGIVVVQLGTETDSQDGILLPA
EQIPGEKLKHGDRVKSYVVGVGKGPVGIQINLSRTHPELVRRLFELEIPEVADGSVEIVA
ISREAGHRSKVAVRATVKNLNAKGACIGPRGQRVSNIMRELGGEKIDIIDYSDDPATFVG
NALAPSKVVSVEIVDAEQQVAKVVVPDYQLSLAIGKEGQNARLAARLTGWKIDIHSDMG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ttgatctcgcgggacgcacattcgacgaagccgtggaagaaacagaccactaggatccac
ggaaccctgagaggaagacaagtgaatattgatgtccaggctctgagagccattgagaag
gaaaaaggcatccgggttgaggacatgatccgcaccattgcgaatgccctgctccattcc
tatctggacaaccgggagtcagacgtcccggagagctccaaggcccgcgtggacattgat
gtctccaccggtgctgttgccgtgatcgtcaccgagttcgacgatgagggcaccatctcc
tccgaatacgatgacaccccctccaacttcggtcgtgtctccgctcgcgctgtgcgcgat
gccatcgtccgtcgtctgcgtgaggctgaggcggagcgcgccttcgatgcctacgccgaa
tacgagggcaccgtcatgtccggccttgtccaggccgattctcgtgctgcggagcgtggc
atcgtcgtggtccagctcggtaccgaaactgacagccaggacggcatcctgctgcccgcc
gagcagatccccggtgagaaactcaagcacggtgaccgcgtcaagagctatgtggtcggc
gtgggcaagggtccggtcggcatccagatcaacctctcccgtacccacccggaactcgtg
cgccgtctgttcgagctggagatccccgaggtggctgatgggtccgtcgagatcgtggcg
atctcacgcgaggccggtcaccgctccaaggtggctgtccgggcgacggtgaagaacctc
aacgccaagggtgcgtgcatcggaccgcgcggtcagcgtgtgtcgaatatcatgcgcgag
ctcggtggagagaagatcgacatcattgactactctgatgatccggccacctttgtcggc
aatgccctggcaccgtcgaaggttgtcagcgtcgagatcgtcgatgcggagcagcaggtc
gccaaggtggttgtgcccgactaccagctgtctctcgcgatcggcaaggaggggcagaat
gcccgcctggcagcgcgtctgaccggatggaagatcgacatccactccgatatgggttaa
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