Corynebacterium efficiens: CE1975
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Entry
CE1975 CDS
T00103
Name
(GenBank) putative DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cef
Corynebacterium efficiens
Pathway
cef03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CE1975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cef03400
]
CE1975
Enzymes [BR:
cef01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CE1975
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CE1975
DNA repair and recombination proteins [BR:
cef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CE1975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Zf-Nsp1alpha
Motif
Other DBs
NCBI-ProteinID:
BAC18785
UniProt:
Q8FP17
LinkDB
All DBs
Position
complement(2086475..2087332)
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AA seq
285 aa
AA seq
DB search
MPELPEVEVVRRGLEEHMVGRTIVSAAVVHPRTARNQAGGGAEIEANLTGLRVGATNRRG
KFLWLELDDVAQQAPSGLGLLVHLGMSGQMLVKSPDATLNPHLRARAELDDGNEVWFVDQ
RTFGYWWLGELVDGVPGRVSHIARDLLDDALDIPALAAVLKTKNTEIKRLLLNQEIVSGI
GNIYADEMLWEAGIHPRQKASRISLTRLVALLEAGREVMTRALDQGGTSFDALYVNVNGA
SGYFSLSLNAYGQAGKPCARCGTPIARETFMNRGSHFCNRCQKVR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactaccggaagttgaggtggtccgccgcggtctggaggagcacatggtggga
cgcaccatcgtctccgccgcggtggtgcatccgcgtacagcccgcaaccaggccggcggg
ggcgccgagatcgaggccaatctcaccggcctgagggtcggtgccaccaaccggcgcggg
aaattcctgtggctggaactcgatgatgttgcgcagcaggcaccctccggtctggggctg
ctcgtccatctgggtatgagtgggcagatgctggtcaagtcccccgacgcaaccctcaac
ccgcatctgcgggcacgggcggagcttgacgacggcaacgaggtctggttcgtcgaccag
cgcaccttcgggtactggtggctgggggagcttgtcgacggggtccccggacgtgtctct
cacatcgcccgtgatctcctcgatgacgcccttgacatcccggcgctcgccgcggtgctc
aagacgaagaacaccgagatcaaacgtctcctgctcaatcaggagatcgtctccggcatc
ggcaacatctacgccgatgagatgttgtgggaggcgggtatccacccccggcagaaggcc
agcaggatctccctcacccgtctggtggcgctgctggaggccgggcgtgaggtcatgacc
cgcgccctggaccagggcgggaccagcttcgatgcgctctacgtcaatgtgaatggcgcg
tccgggtacttctcactctcgctcaatgcctatgggcaggcgggtaaaccgtgtgcgcgg
tgtgggaccccgatcgcccgggagaccttcatgaaccggggcagccacttctgcaatcgt
tgtcagaaagtgcgctga
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