Corynebacterium efficiens: CE2029
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Entry
CE2029 CDS
T00103
Name
(GenBank) putative DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cef
Corynebacterium efficiens
Pathway
cef03030
DNA replication
cef03430
Mismatch repair
cef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CE2029
03430 Mismatch repair
CE2029
03440 Homologous recombination
CE2029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cef03032
]
CE2029
03400 DNA repair and recombination proteins [BR:
cef03400
]
CE2029
Enzymes [BR:
cef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CE2029
DNA replication proteins [BR:
cef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CE2029
DNA repair and recombination proteins [BR:
cef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CE2029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAC18839
UniProt:
Q8FNW4
LinkDB
All DBs
Position
complement(2142784..2146398)
Genome browser
AA seq
1204 aa
AA seq
DB search
MSSRFLPPKSPARLSRMAKQSSFVHLHNHTEYSMLDGMAKIDMLADEVNRQQMPAVGITD
HGNMYGSNAFYRKMTEAGVKPIIGIEAYLAPESRFNKERVRWGEPHQKSDDVSASGAYLH
QTMLAENATGLRNLFYLSSMASYEGQLGKWPRMDAEIIAERAEGIIATTGCPSGDVQTRL
RLGQFNEALEAAAMWQDIYGRDNYFLELMDHGLDIENRVRSELLEIGRKLNLPPLVTNDC
HYVLESQAQAHEAMLCVQTGKTLHDEDRFKFDGSGYYIKTAEQMRSLWDDTVPDGCDNTL
WIAERVQDYGEIWEEHPHDRMPVADVPEGHTPTSWLHHEVMAGLEDRFPGQQVPQEYIER
AEYEISVIDMKGYPSYFLIVAEIIKHARSIGIWVGPGRGSAAGALVAYALTITNIDPIEH
GLLFERFLNPERPSAPDIDIDFDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQAIKD
SARVQFGQPGYQIADRITKVLPPPIMAKDIPLSGITDPEHERYNEAGEVRALIETDPDVR
KIYDTARGLEGVVRQAGVHACAVIMSSQPLLECIPMWKRPADGAYITGWDYPACEAIGLL
KMDFLGLRNLTVIGDAIENIKANRDGKVVDLENLSIEDEETYKLLSRGETLGIFQLDGGG
MQELLKRMQPTGFNDIVAALALYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEPLAEI
LGETYGLIVYQEQIMKISQKVANYTAGQADGFRKAMGKKKPEVLAKEFAAFEAGMKANGF
SADAIKTLWDTILPFAGYAFNKSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVGDNKDK
TAIYLADCRHLGIRVLSPDINESALNFMPVGTDIRYGLGAIRNVGSEVVDSIIETRQSKG
MFRDFSDYLDKIDTLPCNKRITESLIKAGAFDSLGHTRKGLMLVYEDAVDSVIATKKAAD
KGQFDLFASFGAEAEDEVGGFFQIAVPDDKWDRKHELALEREMLGLYVSGHPLDGYEDAL
AAQIDTPLTTIIAGELRHGAEVTVGGIISGVDRRFSKKDGSPWAIVTMEDHNGASVELLV
FNKVYSIVGSLIVEDNIILAKAHVSIRDDRMSLFCDDLRVPELGPGNGSGLPLRLTMRTD
QCTMTNISKLKQVLVGNRGESDVYLNLVDGDSSTVMILGDHLRVTRSASLMGDLKATMGP
GILG
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggtttctccccccaaaatccccggctagactgtctcgcatggccaagcaa
tcctcttttgttcatcttcacaaccacaccgagtactcgatgctggacggcatggccaag
atcgacatgctcgccgatgaggtcaaccgtcagcagatgcccgccgtcggcatcacagac
cacggcaacatgtacggttccaacgccttctaccggaagatgacggaggcgggtgtcaaa
ccgatcatcggcatcgaggcctacctggcacctgaatcccgtttcaacaaggaacgcgtc
cgctggggtgaaccccaccagaaatcagatgatgtctccgcctcgggtgcctacctgcac
cagacgatgctggcggagaacgccaccggcctgcgcaacctcttctacctgtcctccatg
gcctcctacgaggggcagctgggcaaatggccccgcatggatgccgagatcatcgcggaa
cgcgccgagggcatcatcgccaccaccgggtgcccgtccggggacgtgcagacacgtctg
cgtctggggcagttcaatgaggccctggaggccgccgcgatgtggcaggacatctatggc
agggacaactacttcctggagctcatggatcacgggctcgacatcgaaaaccgtgtgcgc
agtgaactcctggagatcggccgcaagctcaacctcccgcccctggtgaccaatgactgt
cactatgttttggaatcccaggcacaggcgcatgaggccatgttgtgtgtgcagaccggc
aagacgcttcacgacgaggaccgcttcaaattcgacggctccgggtattacatcaagacg
gctgagcagatgcgcagcctctgggatgacacggtgccggatggctgcgacaacaccctc
tggatcgccgagcgtgtccaggactacggggagatctgggaggagcacccccacgaccgc
atgccggtcgccgatgtccccgagggccacaccccgacctcgtggctgcaccatgaggtg
atggccggtctggaggatcgtttccccgggcagcaggtcccgcaggaatacatcgagcgc
gccgagtatgagatctccgtcatcgacatgaaggggtatccctcctacttcctcatcgtc
gcggagatcatcaagcatgcccgctccatcggcatctgggtcggtccgggtcgtggttcc
gccgccggtgcgctggtcgcctacgccctgaccatcaccaacatcgaccccatcgaacac
ggtctgctcttcgagcgcttcctcaacccggaacgcccgtccgcacccgatatcgatatc
gacttcgatgaccgccgtcgtggcgagatgatccgctacgcagcggaccgctggggcgag
gacaagatcgcccaggtgatcaccttcggcacggtgaagacgaagcaggccatcaaggac
tccgcccgcgtgcagttcggccagcccggttaccagatcgccgaccggatcaccaaggtt
ctgccaccaccgatcatggccaaggacatcccactcagcggcatcaccgatccggagcac
gagcggtacaacgaggcaggcgaggtccgcgcactcatcgagacggacccggatgtacgc
aagatctacgacaccgcccggggactggagggcgtggtgaggcaggcaggcgtgcatgcc
tgtgccgtgatcatgtcctcccagccactgctggagtgcatcccgatgtggaaacgtccc
gccgacggtgcctacatcaccgggtgggactatccggcctgtgaggccatcggcctgctc
aagatggacttcctgggtctgcgtaacctcaccgtcatcggtgatgccatcgagaacatc
aaggccaaccgcgacggcaaggtcgtcgatctggagaacctgagcatcgaggatgaggaa
acctacaagctgctgagccgcggcgagaccctcggtatcttccagctcgatggtggtggc
atgcaggagctgctcaaacgcatgcaaccaacgggcttcaatgacattgtcgccgcgctc
gccctgtaccgacccggaccgatgggcgtgaacgcccactgggattacgccgaccgtaag
aacgggcgcaaaccgatcaccccgatccaccccgagctggaggaacccctcgcggagatc
ctcggcgagacctatggcctgatcgtgtatcaggagcagatcatgaagatctcccagaag
gtggccaactacaccgccggtcaggccgatggtttccgtaaggccatgggtaagaagaaa
cccgaggtgctggccaaggagttcgcggccttcgaggccggcatgaaggccaatggtttc
tccgccgatgccatcaagacgctgtgggacaccatcctgccgttcgccggttacgcgttc
aacaagtcccacgccgccgggtacggactggtgtcgttctggacggcatacctcaaggcg
cattacgcgccggagtacatggccgcgctgttgacctcggtgggtgacaacaaggacaag
accgccatctacctggcggactgccgtcacctgggcatccgggtgctctcgccggacatc
aacgaatcggccctgaacttcatgcccgtgggaacggatatccgttatggcctcggtgcc
atccgtaacgtgggttcggaggtggtggactccatcatcgagacccgccagagcaagggc
atgttccgggatttctccgactacctggacaagatcgacaccctgccgtgtaataagcgc
atcaccgagtccctcatcaaggccggtgccttcgattccctgggacacacccgcaagggc
ctcatgctggtctatgaggatgcggttgattccgtcattgccaccaagaaggccgcggac
aaggggcagttcgatctcttcgcctccttcggcgcggaggcggaggatgaggtggggggt
ttcttccagatcgccgttcccgacgacaagtgggaccgcaagcatgagctcgcactggag
cgggagatgctcggcctgtacgtctcgggtcatcccctggacgggtatgaagatgccctc
gccgcccagatcgacaccccgctgaccaccatcatcgccggtgagctccggcacggtgcg
gaggtcacggtcggcggcatcatctccggtgtggatcgacgtttctccaagaaggacgga
tccccctgggcgattgtcacgatggaggatcacaacggcgcctcggtggaactgttggtg
ttcaacaaggtctactccatcgtggggtccctgatcgtggaggacaacatcatcctggcc
aaggcgcatgtgtcgatcagggatgaccgcatgagcctgttctgtgatgatctgcgggtg
cccgaactggggccggggaacggctcaggcctgccactgcggttgaccatgcgcaccgac
cagtgcaccatgaccaacatctccaagctcaagcaggtcctggttggtaaccggggcgaa
tcggatgtctacctcaacctggtcgacggcgacagctcgacggtgatgatcctcggtgat
catctccgggtcaccaggtccgcgagcctcatgggtgacctcaaggccaccatgggaccg
ggaattctcggttag
DBGET
integrated database retrieval system
