Corynebacterium efficiens: CE2272
Help
Entry
CE2272 CDS
T00103
Name
(GenBank) putative ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cef
Corynebacterium efficiens
Pathway
cef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE2272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cef03019
]
CE2272
03009 Ribosome biogenesis [BR:
cef03009
]
CE2272
Enzymes [BR:
cef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CE2272
Messenger RNA biogenesis [BR:
cef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CE2272
Ribosome biogenesis [BR:
cef03009
]
Prokaryotic type
rRNA processing factors
CE2272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
Motif
Other DBs
NCBI-ProteinID:
BAC19082
UniProt:
Q8FN75
LinkDB
All DBs
Position
complement(2416026..2419472)
Genome browser
AA seq
1148 aa
AA seq
DB search
MAKKKASATAHDTDVSPSAVLAADFDRSQLGEKTRVHQLAKQLGLTSKDLVVALDSIGLV
KVAQSTLSREEATRLLDLLAKPVEEAPAEVVPDVEPVEKIRRRVEKNVANEIQQIQEKVE
RELADVVEDTPEDAPEDTPEQAPADTDAADPSEDEEIRRRVEKNVANEIQQIENRVEREL
AEVVARSQDEQQSDEPVDLMAAAQAEAHAELLEDIIPEITPPPTEAPVYAPIFVAPAIIP
TEDLNDTDDPDAQERVARKRRGRRGTGRGKGTGSASGSDVEAVQQKAEDEASTSTVDTPE
PEAVDEPVGIKGSTRLEAQRRRRTEMREEGRNKKRHVVSTREFIERRESMERRMIVRERQ
RTDGTGLVTQVGVLEDDLLVEQFVTSDSQSSMVGNIYLGRVQNVLPSMEAAFIDIGKGRN
GVLYAGEVDWKAAGLGGRGRRIEQALKSGQKVLVQVTKDPVGHKGARLTTQISLAGRYLV
YVPGGRSAGISRKLPGPERKRLKEILGRVVPPQGGTIIRTAAEGVSEENIAADVNRLHTL
WEQIQERTKQEKKSRNTRPVTMYEEPDMLVKVIRDLFNEDFTSLIVDGDRAWNTVRAYIQ
SVAPDLVSRVEHFDRADYDGKDAFEAFGLNTQLEEAMSRKVNLPSGGSLIIDKTEAMTVI
DINTGRYVGKGVGNLEETVTLNNIEAAEEIVRQLRLRDIGGMIVIDFIDMVLPENRDLVL
RRLNEALENDRTRHQVSEVTSLGLVQMTRKRIGAGLLETFSSECEHCAGRGLVIHPDPVD
NVDERVEAKAEERARRHKNQQEDSRPQQPVRDPARHPMVVAMQDLVEDEDHDLDKEFEDL
AASVIITDDAEDTADTAGTVDTADDTEPEITADEVISTVEPEEGPRRRARRRRGRQQETP
ETPVEPEATGDTTADDIAAIAAAAVDIADAEDPDEPSGANYVSDAAGAATSYEQALAEFE
ASPRRRRATRGNSRSDHAPKPEDFKSEPARREVEPIPVEEIGEAEEKPRRRSRGRGRSQR
PAPVVETTVETAVEDIPEETPRRNRPSEVAASAPSRPGRGRRRAVRRSSGHIETLDDATP
TPITPSPADKAGDGEREASPSKGRRRRRRAIRVSGKALSQSTAEKQPEPAAPAGSGRRRR
GTRKPQRG
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagaagaaggcatccgcaactgcacatgacacggacgtgtccccctcggccgtg
ctggccgcggattttgaccgttcgcagttgggggagaagacccgtgttcaccagctggcc
aaacagctcggcctgacctccaaggacctggtggtggcactggattccatcggtctggtc
aaggtcgcccagtcgaccctgagccgtgaggaggccacccgtctcctcgatctgctggcc
aagccggtggaggaggccccggccgaggtcgtcccggatgtggaaccggtggagaagatc
cgtcgccgcgtggagaagaacgtggccaacgagatccagcagatccaggagaaggtcgaa
cgcgaactcgccgacgtggtggaggacaccccggaggacgccccggaggacaccccggaa
caggcccctgctgacaccgacgctgcggacccatcagaggacgaggagatccgtcgccgc
gtggagaagaacgtggccaatgagatccagcagatcgagaacagggttgaacgcgaactg
gcagaggtggtggcccggtctcaggacgaacagcagtcagatgagccggttgatctgatg
gccgcagcccaggcggaggcccacgctgaactgctggaggacatcatccccgagatcacc
ccgccgccgacggaggcaccggtgtatgcaccgatcttcgtcgcacccgcgatcatcccc
accgaggacctcaatgacaccgatgacccggatgcgcaggaacgcgtggcccgcaagcgt
cgtggtcgtcgtggtaccggacgtggcaagggcaccggttcggcatcgggttccgatgtt
gaggccgtccagcagaaggcggaggatgaggcgtcgacaagcaccgttgacacgccggaa
cccgaggcggttgacgagcccgtgggcatcaagggctcgacccgcctggaggcgcagcgc
cgccgccgcaccgagatgcgcgaggagggccgcaacaagaaacgccacgtggtgagcacc
cgcgagttcatcgaacgccgtgaatccatggaacgccgcatgattgtgcgcgaacgccag
cgcaccgacggcacgggtctggtcacccaggtcggtgtgctggaggatgatctgctggtc
gagcagttcgtcacctccgattcgcagtcgtcgatggtgggcaacatctacctggggcgc
gtacagaacgtgctgccgagcatggaggccgccttcatcgacatcggcaagggccgcaac
ggtgtgctctacgccggtgaggtggactggaaggccgccggtctggggggacgtggtcga
cgcatcgaacaggccctgaaatccggtcagaaggtcctggtccaggtgaccaaagacccc
gtcgggcacaagggtgcccgcctgaccacccagatctccctggccggccgctacctggtt
tacgtgcccggtggtcgcagcgccggtatctcccgcaagctgcccggaccggagcgcaag
cgtctgaaggagatcctcggtcgcgtcgtgccaccacagggcggcaccatcatccgcacc
gccgcggagggggtgtcggaggagaacatcgccgccgacgtcaaccgcctgcacactctg
tgggagcagatccaggaacgcaccaagcaggagaagaagtcccgcaacacccgcccggtg
accatgtatgaggaaccggacatgctggtcaaagtcatccgtgacctgttcaatgaggac
ttcacctccctgatcgtcgacggcgaccgcgcatggaacaccgtgcgcgcctacatccag
tccgtcgccccggacctggtcagccgggtggagcatttcgaccgcgccgactatgacggc
aaggatgccttcgaggccttcggtctcaacacccagctggaggaggcgatgtcgaggaag
gtgaacctgccgtcgggtggttcgctgatcatcgacaagaccgaggccatgaccgtcatc
gacatcaacaccggccgctatgtgggcaagggtgtgggcaacctcgaggagaccgtcacc
ctcaacaacatcgaggccgccgaggagatcgtccgccagctgcgtctgcgtgacatcggt
ggcatgatcgtcatcgacttcatcgacatggtcctgcccgagaaccgtgacctggtgctg
cgtcgcctcaatgaggcactggaaaacgaccgcacccgccaccaggtctccgaggtcacc
tcgctgggtttggtgcagatgacccgcaagcgcatcggtgcgggcctgctggagaccttc
tcctccgaatgtgagcactgcgccggacgcggcctggtgatccaccccgatccggtcgac
aatgtcgacgagcgtgtggaggccaaggctgaggagcgtgctcgccgccacaagaaccag
caggaggattcccgcccccagcaaccagtccgggatcccgcccggcacccgatggtggtg
gcgatgcaggacctcgtcgaggatgaggaccacgacctggacaaggagttcgaggacctc
gcggcatcggtgatcatcaccgatgatgctgaggacacggcggacaccgcgggcactgtg
gataccgcggacgacaccgagcccgagatcaccgccgatgaggtcatctccaccgtggaa
ccggaggaggggccacgccgacgtgcgcgcaggcgccggggccgtcagcaggagaccccg
gagaccccggttgaacccgaggccaccggcgacaccaccgccgatgatatcgccgcgatc
gccgccgcagccgtggacatcgccgatgccgaggatccggacgagccctcaggggccaac
tatgtgtcggatgctgcaggggcggctacctcctatgagcaggcactcgccgaattcgag
gccagcccacgtcgccgccgcgccacccggggcaactcccggtcggatcacgcgccgaag
ccggaggatttcaagtccgaaccggcccgtcgtgaggtcgaaccgatcccggtggaggag
atcggggaagccgaggagaagccacgccgccgcagccgtggtcgtggacgcagtcagcgt
cccgcaccggtcgtggagaccaccgtggaaaccgcagtcgaggacatcccggaggagaca
ccccgccgtaaccgtccgagcgaggtcgcagccagcgccccatcgcgcccgggacgtggg
cgacgccgcgcggtgcgccggtcgagcggtcacatcgagacgcttgacgacgcaaccccc
acccccatcaccccatcccccgccgataaggcaggggacggggagcgggaggcgtcgcca
agcaagggccgtcgacgtcgccgtcgcgcgatccgggtttccggtaaggcactttcccag
tcaactgcggagaagcagcccgaacccgccgcccccgccggcagcggtcgtcgacgcagg
ggaacccgtaagccacagcgtggttag
DBGET
integrated database retrieval system
