Corynebacterium efficiens: CE2835
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Entry
CE2835 CDS
T00103
Name
(GenBank) conserved hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cef
Corynebacterium efficiens
Brite
KEGG Orthology (KO) [BR:
cef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cef03016
]
CE2835
Enzymes [BR:
cef01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CE2835
Transfer RNA biogenesis [BR:
cef03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CE2835
Prokaryotic type
tRNA splicing ligases
CE2835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF1949
Motif
Other DBs
NCBI-ProteinID:
BAC19645
UniProt:
Q8FLN3
LinkDB
All DBs
Position
3015746..3016909
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AA seq
387 aa
AA seq
DB search
MSPMTTDVISFASVLEDAALNQAKATATMPFIYPHVALMPDAHYGLGSSVGTVFGTKGAI
IPAAVGVDIGCGMIGVRTQFTASDLEGRDLTRLRDALERAIPLSPGNYNKGALEDSALVK
IGELETLAEKNDVDLSHSPKWKQQLGSLGGGNHFIELCLDEEDRVWMFLHSGSRGVGNKI
AQKHIRIARDACAGEDLPDRDLAYLTEDTREFNDYLRELEWAQRFAFLNREEMMDRFATQ
LGRFVGTPVSEIERINCHHNYTVEEEHYGETVWLTRKGAVLADEGTMALIPGSMGTASYV
VEGKGNREALRSAPHGAGRRMSRTQAKKTFTAKDLDNRMSGIVYRPGKEWIDEIPDAYKD
IDQVMADATDLVSIRHKLRQIVNVKGT
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacccatgaccacagatgtcatctccttcgcctccgtcctggaggatgccgcactc
aaccaggcgaaggccaccgccaccatgccgttcatctacccgcatgtcgccctcatgccc
gatgcccactacgggctgggttcctcggtgggcaccgtcttcggcacgaagggcgcgatc
atccccgccgcggtcggggtggacatcggctgcggcatgatcggcgtgcgcacccagttc
accgcctccgacctggagggccgcgacctgacccgactgcgggatgccctggaacgcgcc
atccccctgtccccgggcaactacaacaagggcgcactggaggattccgccctggtgaag
atcggggaactggagacactcgcggagaagaacgatgtggatctgtcccactccccgaag
tggaagcagcagctgggatccctcggcggtggcaaccacttcatcgagctgtgcctggat
gaggaggaccgagtctggatgttcctccactccggatcccgcggggtgggcaacaagatc
gcccagaaacacatccgcatcgcccgcgacgcctgcgccggggaggacctgcccgatcgg
gatctggcctacctcaccgaggacacccgggagttcaacgactacctgcgcgaactggag
tgggcgcagcgtttcgccttcctcaaccgcgaggagatgatggaccgcttcgccacgcag
ctgggccggttcgtgggcacacccgtctcagagatcgaacgcatcaactgccaccacaac
tacacggtggaggaggagcactacggggagaccgtctggctgacccggaagggcgcggta
cttgccgacgagggaaccatggcactgatccccggctccatgggcaccgcctcctacgtc
gtggagggcaagggcaacagggaggccctgcgctccgctccccacggcgcgggccggcgc
atgtcccgcacccaggccaagaaaaccttcaccgcgaaggacctggacaaccggatgtcc
ggcatcgtctaccgcccgggcaaggagtggatcgatgagatcccggatgcctacaaggac
atcgaccaggtgatggccgacgccaccgatctggtgagcatccggcacaaactgcgtcag
atcgtcaacgtcaagggcacctag
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