Cellvibrio sp. KY-GH-1: D0C16_01370
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Entry
D0C16_01370 CDS
T06422
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg02020
Two-component system
ceg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D0C16_01370
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D0C16_01370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceg03021
]
D0C16_01370
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ceg02035
]
D0C16_01370
Transcription machinery [BR:
ceg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0C16_01370
Bacterial motility proteins [BR:
ceg02035
]
Flagellar system
Flagellar assembly proteins
Stator
D0C16_01370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_38
UPF0122
YopX
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QEY18843
LinkDB
All DBs
Position
340981..341739
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AA seq
252 aa
AA seq
DB search
MNNSVVDNAGVSDYGYASNLAPGTAACTLAPAQEQQLLIQYLPLVKRIVRQLSLQANQVM
DRDDMEQIGLMGLLESLRRYGQPDENFAAFAKLRIRGAILDELRRQDWRPRQVRQQTHKI
RDAIRELSRRLGRVPQDSEVMKYTGLSDKDYQEFLQADACEAIESLDELLLNGPETFSDG
GSGLEEREITERLLAQALSSLNERERLVLMLYYQQELSLKEIALVLDLTDARVCQLSKQA
IQKASRFMQEAK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaataactctgttgtggataacgctggcgtaagcgattacggctacgcatccaacctg
gctccaggaacggcggcttgcacgcttgcgccggcacaagagcagcaattgttgattcaa
tatttgccgctggtaaaacgtattgttcgccagttatcgctgcaagccaatcaggtgatg
gatcgcgatgacatggagcaaattggcttgatgggattattggagagcctgcgtcgatat
ggtcagcccgatgaaaactttgcggcgtttgccaagctgcgtattcgcggcgcaatcctg
gatgagctgcgccggcaagattggcgcccgcgtcaggtgcgccagcaaacgcacaaaatt
cgcgatgcaattcgtgagctgagtcgtcgtttaggccgcgtgccacaagactccgaagtg
atgaagtataccggcttgagtgataaagattaccaggaatttttacaagcagatgcctgt
gaagcgattgaaagcctggatgaactattgttaaacggtccggaaacattttccgatggt
ggatcgggtttggaggagcgtgaaattaccgagcgtttattagctcaggcgctatccagt
ttgaatgaacgtgagcgtttggtgctgatgctgtattaccaacaagagttgagtttaaaa
gagatcgccctggtgttggatttaacggatgcgcgtgtgtgccagttaagtaagcaggca
attcaaaaagccagccgctttatgcaagaagccaaatag
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