Cellvibrio sp. KY-GH-1: D0C16_08435
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Entry
D0C16_08435 CDS
T06422
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ceg
Cellvibrio sp. KY-GH-1
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceg03032
]
D0C16_08435
03400 DNA repair and recombination proteins [BR:
ceg03400
]
D0C16_08435
Enzymes [BR:
ceg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D0C16_08435
DNA replication proteins [BR:
ceg03032
]
Prokaryotic type
DNA Topoisomerases
D0C16_08435
DNA repair and recombination proteins [BR:
ceg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D0C16_08435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QEY16001
UniProt:
A0A5J6P6F0
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Position
1944232..1946217
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AA seq
661 aa
AA seq
DB search
MSTLLIVESPAKAKKMREYFPTFKILATLGHIKDLPVDTMGVEPPHHKPQWQTIHGKGKV
VKDITDAAKKATIIYVATDLDREGEAIAGHVVNELGNTHKTKISRITFDEISKKALEIAI
ANKRQINWALVRAQEARRVLDRYVGYLITRELNAKFKSLGINHFFTGGRVQSVVLRLIVE
RHLAIQAFKPVEHFGVTATLKHAGISFTATWVNGLPPGQLMTDRARAEMIEKRTKALIVD
AVNQKPKQISPPVPLTSSAFVQLMATKLKLTTKQSMAAAQKLFEAGLITYHRTDSPNISK
DFIEQIRAFARGKQLPLPLQAPFHKAKDSAQQAHECIRVTDINLLVLGPEIDDKIMRDVY
SWIWKVTLESQLSAGEDILTTVQFHNEAMDFFKTNATRMKTAGWRNAAEKCIPITSLSTS
EDEEEEPPVSLPDLKIGERIACESVKLDVKYTEPPLVYTEKSLVKELDRLGIGRPSTYAT
IIERIVTLDYVTRHKTLKFTPTPKGIAVIHLLKNYFSFMEYLYTADIEESFDKIASRKAD
YLPVISHAHDALLQEIEKFRAAAIPDQVKALISQFANDQSASKTPEKTSTKKTATQTTAK
PASNKSPTTGTVKVGDKCPECQKGTMVLRTINSGKNQGKEFKGCTSFPTCRFFSWAQGSN
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccttactgatcgttgaaagtccggcgaaagccaagaaaatgcgggagtatttt
cccacgtttaaaatcctggctacgctgggccatatcaaggatttgccggtagacaccatg
ggtgtcgaaccaccgcatcacaaaccgcaatggcaaaccattcacggcaaaggcaaggtt
gttaaagacattaccgatgccgccaaaaaagccaccattatctatgtcgccactgacctt
gatcgcgagggtgaagcgattgcaggacatgtggtcaacgaattgggcaatacccataaa
accaagatatcccgcattacctttgatgagatttccaagaaagcacttgaaatagcgatt
gccaacaaacgccaaatcaattgggcgttggtcagggcacaagaagcacgccgtgtgctg
gatcgctatgttgggtacctgatcacccgggaactcaatgccaaatttaaatccctgggt
atcaatcatttttttaccggtggacgcgttcagtccgttgtattgcggctgatcgttgaa
cgccatctcgctatccaggcatttaaacctgttgagcactttggtgtaacagcaacgctt
aaacatgcgggtataagctttactgccacttgggtgaacggattaccccccggtcaattg
atgactgatcgtgcgcgggcagaaatgatcgaaaagcgcaccaaggcattaattgtcgat
gcggttaatcaaaagcccaagcaaatctcaccacccgtaccattgacctccagcgccttt
gtgcagctgatggcaacaaaactcaagctaaccactaaacaatccatggcggccgcgcag
aagctgtttgaggccggtttaattacctatcaccgcactgatagccccaacatatcaaaa
gactttattgagcagatacgggcattcgcccgaggcaagcaattacccctaccgttacag
gcaccgtttcacaaagccaaagacagcgcacagcaagcgcatgaatgtatacgggtcact
gatattaacttgctggtattgggccccgagattgacgataagatcatgcgcgacgtgtat
tcctggatatggaaagtcactctggaatcgcaattgagcgcgggtgaagacattctgaca
accgtgcaatttcacaatgaggcaatggattttttcaaaaccaatgccacccgcatgaag
actgcaggctggcgaaatgctgctgaaaagtgcatacccattacgtcactgtccaccagt
gaggacgaagaggaagaacctcctgtttcactaccggatttaaaaattggtgaacgtatt
gcctgtgaatccgtgaagctcgatgtcaaatatacagaaccaccgttggtatacaccgaa
aaatccctggtaaaagaattggatcgcctgggaattggtagaccatccacctatgccacc
attattgagcgcatcgtcacgctggattatgtgacacggcataaaacactgaaatttaca
cccacacccaaaggcatcgcggttatccatttattgaaaaattatttttcatttatggaa
tacctatacaccgccgacattgaagagtcgttcgacaaaattgcctcacgaaaagcagac
tacttacctgtgataagtcatgcccatgatgcattgctgcaggagattgaaaaattccgt
gctgcagcaatccctgatcaggttaaagccctgatttcccaattcgcaaacgaccaaagc
gcatcaaaaacacccgagaaaacatccactaaaaaaactgccactcaaaccactgctaaa
ccagccagtaataaatcgcccacaacaggcaccgtaaaagtgggcgacaaatgcccggag
tgccagaaaggaacaatggtgttacgcaccattaacagtggaaaaaatcaaggcaaagaa
ttcaagggctgcaccagcttccctacgtgtcgcttcttttcctgggcacaaggtagcaat
gcatga
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