Cellvibrio sp. KY-GH-1: D0C16_09195
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Entry
D0C16_09195 CDS
T06422
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg03030
DNA replication
ceg03430
Mismatch repair
ceg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0C16_09195
03430 Mismatch repair
D0C16_09195
03440 Homologous recombination
D0C16_09195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceg03032
]
D0C16_09195
03400 DNA repair and recombination proteins [BR:
ceg03400
]
D0C16_09195
Enzymes [BR:
ceg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0C16_09195
DNA replication proteins [BR:
ceg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0C16_09195
DNA repair and recombination proteins [BR:
ceg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0C16_09195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QEY16138
LinkDB
All DBs
Position
complement(2092285..2095818)
Genome browser
AA seq
1177 aa
AA seq
DB search
MPAANFVHLRLHTEFSLSDSLVRIKSLIKRVAELNMPACAITDQTNFYGLIKFYKAAQGS
GVKPIAGSDFWVASSDAEGKPTLLTLLAMNDKGYKNIIELISRAWRQGQQQGVAYIQREW
ISEYSEGVIALSGGKYGDVGMALLGGRHAQAQELLQGWMREFPNRYYLELQRTGRENDEN
HLHAAVSLASELNCPVVATNDVRFLKASEFEVHEARVCIGEGRTLDDPRRERRYSDQQYL
RSAEEMAELFSDIPEAIANTIEIAKRCTINIQMGKYFLPEYPVPEGLTEAEFFRKISHEG
LEERLERILDRSAANYAERRKIYEDRITFELDIIIQMGFPGYFLIVMDFIQWAKDHDIPV
GPGRGSGAGSLVAYSLKITDLDPLQYDLLFERFLNPERVSMPDFDIDFCMDNRDKVISYV
ADNYGRDAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPPTPGMTLAQALEEE
PQLKEFIAIDGDAGEIWEMAVQLEGLTRNVGKHAGGVVIAPTKLTDFAPLFCDETGSGLV
TQFDKGDVEEAGLVKFDFLGLRTLTIIDWARIMIDKQRLKKGESPLDISAIPLDDAKTFG
LLKRAETTAVFQLESRGMKDLIKRLQPDNIEDLIALVALFRPGPLESGMVDDFINRKHGR
AQVAYPDAKFQHHTLKPVLEPTYGVIVYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPE
EMAKQRSVFEEGAKGQGVDPELAIKIFDLVEKFAGYGFNKSHSAAYAIVSYQTAWLKAHY
PAHFMAATMSSDMDKTDKVVTFIEECRTMKLKLLPPDVNSGEFHFTVDDDGRIIYGLGAI
KGLGEGPVESIIAARNEGGPFTDLFDFCARVDPRKVNKRALEAIIRSGAADRLGPTYNAH
DHLIDHDRAVMFASMGEAVKTAEQAAANSNAGMMDLFGAVIAEEQSTKDVYADFRRSRSW
TMKERLNAEKETLGLYLTGHPIDEYESELEHLVSSRIANLKPEKGNQTIAGLIISQRVVK
TRRGDNMAILTLDDRTGRMDVTVFAETFNNSRDLLQKDGLFIVSGQVRYDDFSGMLKMSA
ENVRLLADVRQEKVRELLLELESGVLPSGFAREFAEILEPYRQSPQQDARCGLVIDYLRS
DARAQLRLAPQWNVRPEDELLQRLRDAYGNTRVRLIY
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgccaattttgttcatttgcgtttgcacaccgagttctcacttagcgatagc
ctggtgcgaattaaatcgctgatcaaacgagtggcagaattaaatatgcctgcctgtgct
atcaccgatcaaaccaacttctatggcttgattaagttttataaggcggcgcaaggttcg
ggtgttaagccaattgcgggcagtgatttttgggttgccagcagtgatgcggaaggcaag
ccaaccctgttaacgctattggctatgaatgacaagggttataaaaatattatcgaatta
atttcccgtgcctggcgccagggccagcaacagggtgttgcctatattcaacgtgagtgg
attagtgaatatagtgaaggcgttattgccttatccggtggtaagtatggagatgtgggt
atggcgttgctaggaggtcgccatgcacaagcgcaggagttattgcagggttggatgcgg
gaatttccaaatcgttattatctggagctccagcgcactggtcgtgaaaatgacgaaaat
catttgcacgcggctgtgtctttagcgagtgaattgaattgtccggtagtggcaaccaat
gatgttcgctttttaaaagccagcgaatttgaagttcatgaggcgcgtgtgtgtatcggt
gaggggcgcacactcgacgacccacggcgtgagcgtcgctacagtgaccagcaatatctg
cgttctgcagaagaaatggcggagttgtttagcgatattccagaggccattgcgaacacc
atcgaaattgcaaaacgttgcaccattaatattcaaatgggtaaatattttttgcccgag
tatccggtgccggagggtttaaccgaagcagaatttttccgcaaaatttcgcatgaagga
ttggaagagcgcctggagcggattctggatagatccgctgccaattatgcagagcgtcgt
aaaatttacgaagaccggattacttttgaattagatattattatccaaatgggtttccca
gggtatttcctgatcgtaatggattttattcagtgggccaaggatcacgatatcccggta
gggcctgggcggggttcgggcgcaggttcactggtggcctactcgttaaaaattaccgat
ttggatccgctgcaatatgatctcctgttcgaacgtttcctgaacccggaacgggtatcc
atgcccgactttgatatcgatttctgcatggataaccgcgataaagttatttcctatgtg
gcggataactatgggcgcgatgcggtaagccagattattacctttggtaccatggccgca
aaagcggtagtgcgcgacgtcgcgcgcgtgcaagggaaatcctacgggcttgccgataag
ctatccaaaatgattccgcccacgccgggtatgacactagcgcaggcgttagaagaagag
ccgcagttaaaagaatttattgcgattgatggtgatgccggtgaaatttgggaaatggct
gtgcaattggaagggcttacgcgcaacgtcggcaagcatgccggcggtgtagttatcgcc
cctaccaagttaactgattttgctccactattttgcgacgaaactggtagcggcctggtt
actcaatttgataaaggggatgtagaagaagcaggcttggtgaagttcgacttcctcggc
ctgcgtacgctcaccattatcgattgggcgcgtatcatgattgataaacagcgcctgaaa
aaaggtgagtcaccactcgatatcagtgccattcctcttgatgatgcgaaaacatttggc
ctgctaaaacgcgcagaaactaccgcggtattccagttggaatcccgcgggatgaaagac
ctgattaagcgcttacagccagataacattgaagatctgatcgcactggttgcgttgttc
cgtccggggccgttggaatcgggcatggtggatgactttatcaatcgtaaacacggtcgc
gcgcaagttgcttatcccgacgcaaaattccagcatcacaccttaaagccggtactggag
ccaacctatggtgtaattgtttatcaggaacaggtaatgcaaattgcgcaggtgcttgcc
ggttatacgctcggtggtgcagatatgctgcgccgtgcgatgggtaagaaaaaaccggag
gagatggccaagcaacgctcggtgtttgaagagggtgctaaagggcagggtgttgatcct
gaattggcgataaaaattttcgacctggtggaaaaatttgcgggttatggttttaacaaa
tctcactctgccgcttacgcgattgtttcttatcaaaccgcttggttaaaagcgcattac
ccagcgcattttatggcggcgaccatgtcatccgatatggataaaaccgataaggtagtt
acctttatcgaagaatgtcgcactatgaaattgaaattgttgccgccggacgtgaattcc
ggcgagtttcattttacggtggatgacgatggtcgaattatttatggccttggtgcgatt
aaaggtttaggcgaaggcccggttgaatctattattgccgcgcgtaatgaaggtgggcca
tttacagatttatttgatttctgcgcccgtgtagatccacgtaaagtaaacaagcgcgcg
ttagaagcgattattcgctcaggtgcggcagatcgtttgggccccacctataacgcacat
gatcatttaattgatcatgatcgcgcggtgatgttcgcctctatgggtgaagctgtaaaa
acggcggagcaagcagctgcaaattctaatgcgggaatgatggatttattcggtgctgta
attgcggaggaacaatccaccaaagatgtatatgccgacttccgtcgctcgcgctcctgg
actatgaaagagcggttgaatgcagaaaaggaaaccttgggtttatatttaaccgggcat
ccaattgacgagtatgaaagtgaactggaacatttggtaagctcgcgaatcgccaattta
aaaccggaaaaaggcaatcaaaccatagctggattaatcatttcgcaacgtgtagtaaaa
accaggcgcggcgacaacatggccatattgacgcttgatgatcgtaccggacgaatggac
gttacagtttttgcggaaacgtttaataattcgcgcgatttattgcagaaggatggtttg
ttcattgtcagtgggcaggttcgttacgatgactttagcggcatgttaaaaatgagtgcc
gagaatgtgcgcttgctcgccgatgtgcgccaggaaaaagtgcgtgaattattgctagag
cttgagtctggagtattgccctccggctttgcgcgtgaatttgcggaaatacttgagcct
tatcgtcaatcaccccaacaagatgcacgttgtgggttggtaatcgattatttgcgcagt
gacgcgcgcgcgcaattgcgtttggctcctcagtggaatgttcgccctgaagacgagttg
ctgcagcgtttgcgcgatgcttatggaaatactcgcgtacgtttgatctattag
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