Cellvibrio sp. KY-GH-1: D0C16_09565
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Entry
D0C16_09565 CDS
T06422
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg03030
DNA replication
ceg03430
Mismatch repair
ceg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0C16_09565
03430 Mismatch repair
D0C16_09565
03440 Homologous recombination
D0C16_09565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceg03032
]
D0C16_09565
03400 DNA repair and recombination proteins [BR:
ceg03400
]
D0C16_09565
Enzymes [BR:
ceg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0C16_09565
DNA replication proteins [BR:
ceg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0C16_09565
DNA repair and recombination proteins [BR:
ceg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0C16_09565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
HUTI_composite_bact
DUF4143
Motif
Other DBs
NCBI-ProteinID:
QEY18973
LinkDB
All DBs
Position
complement(2176281..2176928)
Genome browser
AA seq
215 aa
AA seq
DB search
MDIHVQHKPADHLVVFDFETTGLSPDMGDRAIEIGAVLIENGRITDRFQQLMNPGIRIPL
FIENLTGITNAMVKGARKNADVMGEFYEFIAGHNLVAHNASFDERFLRAEFRRIKKHFSG
GIACSLLAARRIFQLAPNHQLATLASYKDLPNEGIYHRALADAEVTAHLWLSMLGELREH
HRQESPTFDFMYRLTKTPKHQLRKFYLQTTAKESN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggacattcatgtgcagcataagcctgcggatcacttggtggtattcgatttcgaaacc
acggggctttcgccagatatgggcgatagggccattgaaataggggcggtgctgattgaa
aacgggcggattactgatcgcttccagcaactaatgaacccgggtatacgtatcccacta
tttatcgaaaacctcactggcatcaccaacgccatggtaaaaggcgcgcgcaagaatgcg
gatgtgatgggtgaattctatgaatttattgccgggcataatctggttgcacacaatgcc
agttttgatgagcgctttctgcgtgcggaatttcgccggattaaaaaacatttttccggc
ggtattgcgtgcagtttgctagccgcgcgccgtatttttcaattggctcccaatcatcaa
ttggcaaccttagctagttataaggatttgcccaatgaaggtatttatcaccgtgcatta
gctgatgcggaagtgactgcgcatttatggttaagtatgttgggcgaactgcgcgagcat
catcggcaggagtcacctacatttgattttatgtatcgcttgaccaaaactcccaagcat
cagttacgaaagttttatctacaaaccactgccaaggaatccaactga
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