Cellvibrio sp. KY-GH-1: D0C16_09865
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Entry
D0C16_09865 CDS
T06422
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg02010
ABC transporters
ceg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D0C16_09865
03070 Bacterial secretion system
D0C16_09865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ceg02000
]
D0C16_09865
02044 Secretion system [BR:
ceg02044
]
D0C16_09865
Transporters [BR:
ceg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
D0C16_09865
Secretion system [BR:
ceg02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
D0C16_09865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_21
AAA_16
AAA_22
NB-ARC
DUF87
PRK
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QEY16258
UniProt:
A0A5J6P6V8
LinkDB
All DBs
Position
complement(2245696..2247876)
Genome browser
AA seq
726 aa
AA seq
DB search
MDTGLQCLVALAGFHQLPADASQLSHQFAIPGQPFSNTEILRAAKALTFKAKLFSFKLDK
LIGSSLPAIVKTVDGDYIILARVAEEEGKPVKVLVQDLREQAPKTLTAEEFASLWSGEII
YVTRRLGLRESLQQKFDISWFIPSLIKYRKLFGEVIIASFFLQLFALITPLLFQVVMDKV
LVHRGFSTLDVIAFGFLAIAIFEALLGGIRSYVMSHTTSRVDVELGSRLFNHLMALPMAY
FESRQVGQNVARVHELDTIRNFITGSALTLILDLGFTIVFLLVMWYYSTTLFFVVAATIP
CYILLSVFITPILRHRLNDKFKYGAANTAFLTESVTGVQTVKAMAVEPQMQRKWEDQLAH
YVNASFRSQNLGNVANQIAGLINKLMTLGIIWWGAHLVIAGELTVGELIAFNMLAGRVSG
PILKLVQLWQDFQQAGISIERLGDILNTPREPGYNPNRSTLPSIAGQVNFEHVRFRYRHD
GPVILDQFNLQVQPGEIIGIVGRSGSGKSTLTKLIQRLYLPESGRMLVDGVDLAMVDTAW
LRRNIGVVLQENFLFNQTVRENIALTNPAAPMEQIVAVAKLAGAHEFIVDLPEAYDTMVG
EQGSNLSGGQRQRLAIARALLTNPKILIFDEATSALDYESERIIQDNMAHICNGRTVFII
AHRLSTVRICNRIIVMNKGRIVEQGSHDQLLQQQGYYAQLHGYQDAKAAARPMVKKENIE
MEFNHD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggtttacagtgcttggtagcactcgcaggattccaccagctccccgctgat
gcttcacaactctcccaccaattcgcaattcccggtcaaccgtttagcaatactgaaatc
ctccgcgccgccaaagcgctgacttttaaagcgaaattattttcgtttaaactcgataaa
ttaatcggttccagtttgcccgcaattgttaaaacggtcgatggcgattacatcatcctc
gcgcgcgtggctgaagaggagggcaaaccggttaaggtgttggtgcaggatttgcgtgag
caagcgcccaaaacactcaccgcagaagagtttgcatcactctggtctggtgaaattatt
tatgtaacgcgccgcctgggtttgcgcgaaagcctgcaacaaaagttcgatatcagctgg
tttattccctcgttaatcaaataccggaaattatttggcgaagtgattatcgcctcattt
tttttgcagctctttgcgctgattacaccactgctatttcaagtggtgatggataaagtg
ttagtgcatcgcgggttcagtacgctcgatgtcatcgcctttggttttttagcgattgcg
atttttgaagcattgctcgggggtattcgcagttatgtgatgtcccataccaccagccgg
gtggatgtggaattgggctcgcgcctgtttaatcatttaatggccttgcccatggcctat
ttcgagtcgcggcaagtggggcaaaatgtcgcgcgcgtgcatgagctggataccatccgc
aattttattaccggtagtgcacttactttaattctcgatctgggtttcaccatcgtcttc
ctgctggtgatgtggtactacagcaccaccttattttttgtggtggccgccaccatcccc
tgttacatcctgctctcggtatttatcacgccgatattgcgtcatcgcctcaatgacaaa
ttcaaatacggtgccgcgaatacggcattccttaccgaatccgtcaccggtgtacaaacc
gtaaaagccatggcggtagagccgcagatgcagcgcaaatgggaagatcaactcgcccat
tatgtgaatgcctcctttcgtagccagaacctcggcaatgtggccaatcaaattgccgga
ttgattaataagctaatgacactcgggattatctggtggggagcgcatttggtaatcgcc
ggtgaactcaccgttggcgaattgattgcgttcaacatgctcgccggtcgcgtgagcggc
cctattttaaaacttgtacaactctggcaagacttccagcaagcgggtatttccattgag
cgcctgggcgatattttaaataccccgcgcgaacccggttacaaccccaatcgctccaca
ctgccatcgattgccgggcaagtgaattttgaacacgtgcgtttccgctatcgccacgac
ggcccggtgattctcgatcaatttaatctgcaggttcaacctggggaaattattggtatt
gtcggtcgctccggttccggtaaaagcacgcttaccaaattgatccagcggctgtatttg
cccgagtcggggcgaatgctggtggatggagtagaccttgctatggtggataccgcttgg
ctgcgacgcaatattggtgtggtattgcaagagaattttttatttaaccaaaccgtgcgt
gaaaatatcgcgctcactaatcccgccgcgcccatggagcagattgtggcggttgccaaa
ctcgccggcgcccatgaatttattgtggatctccccgaagcttacgacactatggtcggc
gaacagggcagcaacctctccggcggccaacgccagcgcctcgcgattgcccgcgcgtta
ttaaccaatcccaaaatattaatcttcgatgaagccaccagtgcgctggattacgaatcc
gaacgcatcatccaggacaacatggcgcacatttgtaacggccgcaccgtgtttatcatc
gcccaccgcttaagtacggtgcgcatttgcaatcgcattattgtgatgaacaaaggccgc
attgtagagcagggctcgcatgatcagttattgcaacaacaaggctactacgcgcaattg
catggctatcaggatgccaaggcagccgcacgcccgatggtaaaaaaggaaaatattgag
atggagtttaaccatgactaa
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