KEGG   Cellvibrio sp. KY-GH-1: D0C16_12560
Entry
D0C16_12560       CDS       T06422                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
ceg  Cellvibrio sp. KY-GH-1
Pathway
ceg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ceg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    D0C16_12560 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ceg02044]
    D0C16_12560 (tssM)
Secretion system [BR:ceg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   D0C16_12560 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QEY16727
LinkDB
Position
complement(2872355..2875942)
AA seq 1195 aa
MRKLFDFIIHPVLWKLILLVILALAIWFIGPLFAIAEWRPLEPVLHRGLLIFSVLFYFGV
KKLLGVWRERRVNERFMQALANKGASDIQSSSVLDELGKNFALAMTHLKSSTANARTGFF
SSMRQRFVYQFPWYVFIGAPGSGKTTALINSGLQFPLTDVLGRESLKGVGGTRNCDWWFT
EDAVFIDTAGRYITHESHAQQDKDEWAGFLGLLKKFRPRQPLNGAVLTISIADLLTGSEQ
SRNQHAAIIRARLGELSNSLGINFPVYILITKADLLGGFSDYFSMLSKEDRDQVLGFSFS
DQSAHTSPLARDITPVSTDLAVRVRQELDLLGQRLFDGLSDLLVRETDITRRAHSFAFPQ
NFANCLPSIADLIEKIFSGVDVSGVQLRGVYFASGTQEGTPFDRVLGALGRRFGVSSSIN
TQRKMVSGRSYFLKDLITRVILPEAHLAGKNRRAEKRELLIGLIVHSLILLACATFIFLL
VGSYLKNRDYLISVDQKVALISSAVDKTSAADIRGIVDYLPLLNALCCVADGDTFAVLSP
PLEMTYGLYQGEKLDAATQRTYARALQETLLPWVSRRLQQLLVDSGDQDMNNTYQTLKAY
LMLNQAEHYNPAQLLAYVEADIERHFAAGISREQQAGLIFHLRQLFGAEAQMSPYAMDEK
LVLSTRRSLSGFSFAERAYQTIKVDLLQQSALADVSFLTAGGAKSNFVFERNSGKPLSDG
VPGLFTRKGYKEIFLPAVQDQLKATVVEESWVLGEYSSFSEKELTAERMTDIEQVLIRLY
LQDYSSFWDSYLIDLRLISTRSMSESIDVARILSASDSPLWQLVSNFSPELSLGKDLSLT
SQIAGKEVKRRIAEKTSGFDQSLQGLAANLTRSDAVESVVDGRFKEMIELTHGANKETEK
NTLLKLFNEVYLGLSNADFSIRSGARSLENDDAMFKVRSEAARYPIPVRTILEGLTDEGK
RQTEGGIRGALNAELDSSIGEFCRMAISGRYPIDRRSTRDVTFADFSKMFAPAGLMDSFF
NENLRTITDTTGRVWTMRQAADVPLPITSFQQAARIRDVFFPAAVRAPMLNFEYKVLEMD
AGISQLSMDFDGQLFQYAHGPQIPRSVSWPGPLGSNQIRIELSGADLNRKTLVVNGPWAI
MRLFDLGERRQLLPEKFVTTLFIHGQKVVLEVTATSVNNPFYLAELASFSCPARR
NT seq 3588 nt   +upstreamnt  +downstreamnt
atgcgcaaattatttgattttatcattcatccggtgttgtggaagctgatcctgctcgtg
attcttgcgctggctatttggtttattgggcccctttttgcgattgcagaatggcgcccg
ttggagccagtattgcatcgtgggctattgatcttttcggtgcttttctattttggagta
aaaaaattacttggcgtttggcgtgagcggcgtgtgaatgagcggtttatgcaggcactg
gctaacaaaggtgcgagcgatatccaatccagttcagtgttggatgagctagggaaaaac
tttgcgttggccatgacgcatttaaaaagttctactgccaatgcgcgcacgggttttttt
agtagtatgcgtcagcgctttgtctatcaatttccctggtatgtatttatcggtgccccc
ggctctggcaaaaccacggcgctaattaatagcggattgcaatttccattaaccgatgta
ttggggcgtgagtcgcttaaaggtgtcggcggtacacgcaattgtgactggtggtttacc
gaagatgcagtgtttatagatacggcgggccgctatataacgcacgaaagccatgctcaa
caggataaggatgagtgggctggctttttggggttgcttaaaaaatttagaccgcgacaa
ccattgaatggcgctgtgctaactatttctattgctgatttgttaactgggtcagagcag
agccgcaatcagcacgcagcgattatccgagcgcgcctgggtgagttaagtaattcgctc
ggtattaatttcccggtttatattttaattaccaaagctgatttactgggcggtttttcc
gattactttagtatgctgagcaaagaggatcgcgatcaggtattgggttttagtttttca
gaccaatcagcgcacacgtcacccctcgcacgcgacataacacctgtatccactgatcta
gctgtgcgggttagacaagaattggatctgctcgggcagcgtttatttgatggtttgtct
gatttgctcgtacgcgaaacggatattactcgccgtgcacacagcttcgcttttccgcaa
aattttgccaactgtttaccctcgattgccgatctcattgagaaaattttttcgggggta
gatgtgtccggcgtgcagttgcgcggcgtctattttgccagtggcacgcaggaaggaact
ccatttgatcgcgtgttaggtgccttggggcgaaggtttggtgtgagttccagtattaat
actcagaggaaaatggtgtccggacgcagttattttctaaaggatttaatcacgcgagtt
attttgccggaagcacatttggcagggaaaaatcgtcgcgcggaaaagagggagctgctg
attggcttgattgttcacagtcttatactgttggcctgtgcaacatttatatttttactt
gtgggtagctatcttaaaaatcgcgactatctcatcagtgttgaccaaaaagtagcgcta
attagttcggcggtggataagacctccgccgcagatatacggggaattgttgattacctg
ccattgctaaatgcgctttgttgcgttgcggatggcgatacttttgctgttctatctccg
ccgcttgaaatgacctacggtttgtatcaaggcgaaaaattagatgcagcaacccagcgc
acttatgcacgcgcattgcaggaaacattgcttccttgggtttcacgccgattgcagcaa
ctattggtggatagtggcgatcaggatatgaataacacttaccaaacgttaaaagcctat
ttaatgctgaaccaggctgagcactataatcctgctcagttgctcgcctatgtagaggcg
gatattgagcgccactttgccgccggtatctctcgcgagcagcaagcgggattgatattt
catttgcgtcaattgtttggtgctgaggcgcagatgtctccttatgcgatggacgagaaa
ttagtgttgtccacgcgccgttctttaagtgggttttcatttgcggagcgtgcatatcaa
actatcaaggtagatctgttgcaacagtctgcgctcgctgatgtttcttttttaacggca
ggtggagccaagagcaattttgtttttgaacgcaatagtggcaagccgttaagtgatggc
gttcccggcttatttactcgcaaagggtataaggaaatatttttgcctgccgtgcaagat
caattaaaagcaacggtggtagaagaatcctgggtgttaggggagtattcgtcatttagc
gaaaaagaacttacagcggagcgtatgactgatatagagcaagtactgatacggctttat
ttgcaagactattccagtttttgggattcttatttgatcgatttgcgtttgatttccacg
cgctctatgtcggagtcgatagatgttgcacgtatattgtcggcatcagactcacctttg
tggcagctggtaagcaatttctcgcctgagttaagccttggaaaagatctgtcgctgacc
tcgcaaatagctggcaaggaagttaaacggcgtattgccgagaaaacatcagggtttgat
caatccttgcaaggattagctgctaatttgacccgctccgatgcggtcgaatcagttgtg
gatggtagatttaaggaaatgattgaattaactcacggagctaataaagaaactgaaaaa
aacacgttgctgaaattatttaatgaggtttacctcggcttatccaatgctgatttttcg
attcgcagtggcgcaagaagtttggaaaacgacgacgcaatgtttaaggttcgctccgag
gcggcgcgctatccaattccggtgcgtaccattttagaaggattaacggatgagggaaag
cgccagacagagggcggaattcgcggcgcgctcaatgcggaattggatagctctatcggt
gagttttgtcgtatggcaatcagcggacgctatcccattgatcgacgttcgacgcgtgac
gtcacctttgccgatttttccaaaatgtttgccccggcgggattaatggatagctttttt
aacgaaaatctgcgaacaatcaccgatacgaccgggcgtgtttggacgatgcgtcaagct
gccgatgtcccactacctattacttcatttcagcaagcggcacgtattcgcgatgtattt
tttccggcagcggtgcgtgcacccatgttaaattttgaatataaagtgctggaaatggat
gccggcatcagtcagttatccatggattttgacgggcagctttttcaatacgcacatggc
ccacaaatcccacgctctgtgagctggccggggcctttgggtagtaatcaaattcgtatc
gaattgagcggggctgaccttaatcgcaaaacattggtagtgaatggcccttgggcaatt
atgcgcttgtttgatttgggtgagcgtaggcagctattgccggaaaagtttgtaacaact
ttgtttatccatggccaaaaagtagtgctggaagttaccgctaccagcgtaaacaatccc
ttttatcttgctgagttggcgagtttctcttgtccggctcggcgttaa

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