Cellvibrio sp. KY-GH-1: D0C16_13500
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Entry
D0C16_13500 CDS
T06422
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ceg
Cellvibrio sp. KY-GH-1
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ceg03016
]
D0C16_13500 (truB)
Enzymes [BR:
ceg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D0C16_13500 (truB)
Transfer RNA biogenesis [BR:
ceg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D0C16_13500 (truB)
Prokaryotic type
D0C16_13500 (truB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QEY16901
UniProt:
A0A5J6P900
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All DBs
Position
complement(3100753..3101742)
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AA seq
329 aa
AA seq
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MARKKGRPVDGVLLLNKPAGMTSNHALQRAKRLFFVEKAGHTGALDPLATGVLPLCFGEA
TKFSQFLLDADKGYRTCIQLGVATDTCDADGEVIARVSAAAVTRAQVEAALKPLLGDILQ
VPPMYSALKLNGQPLYKMARQGVEVEREPRPVTIYKIDILAFRPGEQAEVELDILCSKGT
YIRSIAVDLGNALGCGAHVKTLHRSLAGLFGEDQCISLDELQVAFEQTQAERGEEAAYTA
LDSHLLGADAPVATLPMVELAANSAYYFRLGNPVMHPQIYRIAPQAAIVRVFCAETDQSP
RAFLGLGEITDDGRVAPKRIIANRSANEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagaaaggccgcccggtagatggcgtattgttattgaataagcccgcaggc
atgacttccaaccatgctttacagcgcgccaagcgtctgttctttgtggaaaaggcgggc
catacgggcgctttggacccactcgcgactggtgtgttgccgctctgttttggcgaggcg
accaagttctcccagtttttgctcgatgccgacaaaggctatcgcacctgtattcaattg
ggcgtggcgacagatacgtgcgacgccgatggcgaagttatagctcgggtttctgcggct
gcagttacccgtgcgcaagtggaagcggcgttgaagccgctgctgggtgatatcctgcaa
gtcccacccatgtattctgcgcttaagctcaacggtcagccgctctataagatggcgcgc
cagggtgttgaggtggagcgtgagccacgtccggtaactatttataaaatcgatattctg
gcatttcgcccgggtgagcaggccgaggttgagttggatatcctctgcagcaaaggcact
tatatccgctcaattgcagtggatttaggtaacgcactgggctgcggtgcgcatgtaaaa
accctgcatcgctcactcgctggtctgtttggtgaagatcaatgcatcagccttgatgag
ctacaagtcgcgttcgagcaaactcaggcagagcggggcgaggaagcggcctatactgct
ctcgatagtcacttattgggtgccgatgcgcccgttgcgaccttgccaatggtggagttg
gctgccaatagcgcctattactttcgtttgggcaacccggttatgcacccacagatctat
cgaattgccccacaagctgctattgtgcgcgtcttttgtgcagaaaccgatcaatcgcca
cgtgcatttctggggctgggtgagattaccgacgatggtcgggtcgccccgaaacgaatt
attgccaatcgctccgctaacgaagcttga
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