Cellvibrio sp. KY-GH-1: D0C16_15840
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Entry
D0C16_15840 CDS
T06422
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg00521
Streptomycin biosynthesis
ceg00523
Polyketide sugar unit biosynthesis
ceg00525
Acarbose and validamycin biosynthesis
ceg00541
Biosynthesis of various nucleotide sugars
ceg01100
Metabolic pathways
ceg01110
Biosynthesis of secondary metabolites
ceg01250
Biosynthesis of nucleotide sugars
Module
ceg_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D0C16_15840 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D0C16_15840 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D0C16_15840 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D0C16_15840 (rfbB)
00525 Acarbose and validamycin biosynthesis
D0C16_15840 (rfbB)
Enzymes [BR:
ceg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D0C16_15840 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
KR
NMT1_3
Motif
Other DBs
NCBI-ProteinID:
QEY17321
UniProt:
A0A5J6PAB4
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Position
complement(3701005..3702057)
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AA seq
350 aa
AA seq
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MRNMLITGGAGFIGSNFCHYWAEKYPQDKVVVLDLLTYAGHRENIQSLENSTSFAFIQGD
IGDQALVEKLFTEHQINCVIHFAAESHVDRSILGPDAFLQTNIMGTHTLLKVAKKFWLDA
GVANHHFHHVSTDEVYGSLTEDAPAFTESTPFAPNSPYSASKAASDHLVRAYHHTYGLNV
TTSNCSNNYGPYQDSEKLIPLIIQNILQGKALPIYGDGKNIRDWLYVEDHCRAIDLILHK
GKIGEVYNVGGENEWRNIDIVNLICAKVDAAVVASPELLVRYPHTPCATSGDAKSLITYV
KDRPGHDRRYAIDPGKCHAELGYHPVESFESGIVKTIHWLLHNQRETVNQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatatgttaatcactggcggcgccggttttattggtagcaatttttgtcactac
tgggccgaaaaatatccgcaagacaaagtggtcgtgttggatttacttacctatgcaggt
caccgtgaaaatattcagtcgttggaaaattccaccagttttgcttttatacaaggtgat
attggcgaccaggcgctggtggaaaagctatttactgagcatcagatcaattgcgtaatt
cattttgctgccgagtcgcatgtggatagatccattctcgggccggatgcattcttgcaa
accaatattatgggcactcatacgcttctaaaagtggcaaaaaaattctggctggatgcg
ggtgttgcaaatcatcacttccatcatgtctcaaccgacgaagtctatggttcactcact
gaagatgcgccggcgtttaccgagtcaaccccttttgcgcccaactcaccttactcggcg
tccaaggcagcgtctgatcacctggtgcgcgcgtatcaccacacctatggtttgaacgtg
actaccagtaattgttcgaataattacggcccttatcaggacagtgaaaaattaattcca
ctgatcattcagaatattttacaaggcaaagcgctgcctatttatggcgacggaaaaaat
attcgcgattggctctatgtggaggaccactgccgcgcgattgacttgattttgcataaa
ggaaagattggcgaggtttataatgtcggtggcgaaaacgaatggcgcaatattgatata
gttaatttaatttgcgcaaaagttgacgcagcagttgttgctagtccggagttgttggtg
cgctatccgcatacgccttgtgcaacgagtggcgatgccaaatcgttgatcacctacgtt
aaagatcgtcccggtcatgaccgtcgctatgcaattgacccaggtaaatgccacgcggaa
ttaggctatcatccggtagaaagttttgagagtggcattgtaaaaaccattcactggttg
ttgcacaaccagcgcgagacggtgaaccaataa
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