Cellvibrio sp. KY-GH-1: D0C16_16660
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Entry
D0C16_16660 CDS
T06422
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg00040
Pentose and glucuronate interconversions
ceg01100
Metabolic pathways
ceg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
D0C16_16660
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D0C16_16660
Enzymes [BR:
ceg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
D0C16_16660
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GFIT
Motif
Pfam:
Pectate_lyase_4
Hamartin
Motif
Other DBs
NCBI-ProteinID:
QEY17469
UniProt:
A0A5J6PEM0
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Position
complement(3875613..3877727)
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AA seq
704 aa
AA seq
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MNSKHFSRRAGQCAAFMAVSLLATVLHAQTLGANLAITGPSAAADGSGFDNTKLVRDGST
ATVSVASGTSNQRVSVKWGSAVSFNTVILRESGSKITNWQLVDNDSGTVFASGTGIGAQK
VVNVGPRSSKKINLIVNATSAPGIAEFEVYNATGTVTSSSKSSSSVALTSSSKSSAILSS
SASSKSSTTPSSTPATSSKSSVASSAVVVSSSVASSSVVSSKSSSASSIADNGAISAACI
QLATNPSVNWRDTALKTDQEIVSCLSKTLGKPVGYGEKALGGFDPNGNSKLTIITKNSSV
SVEQQLLNAITGEAHNWIVFDKVQFAQPSEIGMYRLGCSNPTVQSILGATEAECVNYTQW
CAKNGVSSANCITQFFNVAMNKSTNPIRNPVIGSNKTIDGRGSEAYFLFSGFAIGKDQTG
TPTQTANSVIMTHLKFQGAGHTEDHYCDPDMIRSTGASHDIWIHKNTFDTTGDSAFDVKV
GAHNVTMSFNRLINVKRAVLHGSSDSHTIDTQITTTMHNNAFITTDDSYTLLGNTLRRVP
LLRHGKTHMFNNVFVNYRNQILSLRVGASALMEDSVFMVNAAHQEKSTVEASLAEISANL
FKDISDGYFRNDRNLLWFSDAACNLTPSTQTALTATNGTVANLASNYSAASQSTINSWRF
AAGQDLVKYVNATAGKYGQIPYNSPLAADKYYVLGLAQPACQAR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaattccaaacatttttctcgccgtgccggccagtgcgcggcatttatggctgttagt
ttattggcaaccgtccttcatgcgcagacgctcggcgccaacctggcaatcactggcccc
agcgccgctgctgatggctcgggctttgataacaccaaactcgtgcgcgatggcagtaca
gccaccgtgtcggtggcgagtggtaccagcaatcaacgagtgtcagtgaagtggggcagt
gcggtaagttttaataccgtgatcctgcgcgaaagcggcagcaaaattaccaactggcag
ttggtagataacgacagcggtaccgtctttgccagcggcaccggcattggtgcacaaaaa
gtggtgaatgttggcccgcgttcgtccaagaaaattaacctgattgtgaatgccaccagc
gcgccgggcattgccgaatttgaagtgtataacgcaacgggtactgtgacttcttccagc
aaatcgtcatccagtgtggcgctaaccagctcctcaaaatcgtctgcaatcctgagcagc
tctgcgagcagtaaatcatcaacaacacctagcagtactccggctaccagcagtaaatcg
tcagtggctagcagcgcggtagttgttagcagttcagtggcaagttccagtgttgtatcg
agcaagtccagcagtgcatcttccattgcggataacggggctatcagtgccgcctgtatc
cagttggccaccaatccttcggtgaactggcgcgataccgcgttaaaaactgatcaggaa
attgtcagctgtttgtccaaaactctgggtaaacccgtcggttatggtgaaaaagcgctg
ggcggttttgaccctaacggcaacagcaaactcaccatcatcaccaaaaattccagcgtc
tcggttgagcagcaactcctgaatgcgattaccggcgaagcgcacaactggattgtgttc
gacaaagttcaattcgcccagccatctgaaattggaatgtatcgtttgggttgtagcaac
ccgacggtgcaatccatcctcggcgcgactgaagccgagtgcgtgaattacacccaatgg
tgtgcgaaaaacggcgtgagcagtgctaactgtattacccagttctttaatgtcgcgatg
aacaaatccaccaacccgattcgcaacccggtgatcggctccaacaaaaccatcgatggt
cgcggcagcgaggcttacttcctgttcagcggttttgcgattggtaaagaccaaaccggt
acgccaacgcaaacagcgaatagtgtgatcatgacccaccttaaatttcagggtgcgggc
cataccgaagatcactactgcgacccggatatgatccgatccaccggcgcatcccacgat
atctggattcacaaaaataccttcgacaccaccggcgattcggcctttgatgtgaaagtg
ggcgcgcacaatgtgactatgtcgttcaaccgtttgattaacgtgaaacgcgcggtgctg
cacggctccagcgatagccacaccattgatacccaaatcactactaccatgcacaacaac
gcgtttatcactaccgacgatagctacacgctgctcggcaataccctgcgccgcgtgccg
ctgttgcgccacggcaaaacccatatgttcaacaatgtgtttgtaaactatcgcaaccag
attctgagtttgcgtgtaggcgcgagtgcattgatggaagacagtgtgtttatggtgaac
gcagcccatcaggaaaagagcacagtggaagcctcattggcggaaatcagcgcgaatttg
tttaaggacattagcgacggttacttccgtaatgatcgcaacctgctgtggttcagtgat
gccgcgtgtaatttaaccccatcgacccaaaccgcgttgactgcaaccaacggtactgtg
gcgaatcttgccagcaactacagcgcggcatcacaaagcaccatcaacagctggcgtttt
gcggcgggtcaggatctggtgaaatatgtgaatgctactgccggtaaatatgggcagatt
ccctataactcgcccttggcggcagacaagtattacgtgcttgggctggctcaacctgct
tgtcaggcgcgataa
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