Cellvibrio sp. KY-GH-1: D0C16_16740
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Entry
D0C16_16740 CDS
T06422
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg00040
Pentose and glucuronate interconversions
ceg01100
Metabolic pathways
ceg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
D0C16_16740
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D0C16_16740
Enzymes [BR:
ceg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
D0C16_16740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
3keto-disac_hyd
Glyco_hydro_59_C
DUF6250
Motif
Other DBs
NCBI-ProteinID:
QEY19085
UniProt:
A0A5J6PK35
LinkDB
All DBs
Position
complement(3894186..3899681)
Genome browser
AA seq
1831 aa
AA seq
DB search
MAQTLNPASPVVLNIARLLQSLDTDGNPANGITISPTAAQAAAPVDFNLSLTQFAASPAV
TNLIANSGSVTTSVVSVQQALTHLRDTLVVIGVPIEENSSSAGQSSAPVVVPSSSSGQSS
TPAVSSSTSSLAPSSIASSVAASVTPSSVAASVAASSTPVVVASSTPASSVAASVTPSSI
AASSTSEVVASSVPASSVAASVTPSSVAASSEPVVAPSSTAASSEAVSSAAVVASTSAQS
SIAPSAFDAANGWASVGTNNLGHAGTTGGVTADAAHTYTVTNRNELLAALYTNLVINNDG
SFTGTVDTTPKIIYIDGTVNLNMNKALMEQTEADYICPIDGTSIKVAYNFEDYKNFYDPN
GAWGTKAVSGDLETARVCASNKQKAVVQIKVGSNTTIIGKNNNAKIVRGHVRLSPPYDNI
IIRNVHFEDAFDMFPQWDPTDSGGRWNSLYDNISVDGATHVWIDHCSFSDGANHDKLYPP
VFAAPYNLPEMKVQHHDGAVDVSKNANYVTLSYNYVHDHDKTHLVGSSDTIAADNGPKFL
KLTMHHNYFKDVTQRLPRVRMGMVHLYNNLYDGQLKPTDVDRHYGFSVGMATGQFGKLYA
ESNVFEIAASTDGVQATVENLYSVSFKATSSVINACKAASYTDADCSTLFYETGSLLNGA
PVDIMAAAVANAAAQTTPLVLNSAQTYWMPSSYYSYTLDGTNGLRDAIIAGAGAGLCADC
ANLTKPAPSSSSSASSVAGGSASSAPLGGGSSGSSNSSSSASSSEAPIVMNCGADVYFCD
DFAASSASNWNLLPVAGPTGVFDLFTQNSNQMLRYTAASAGGVLALVKPAAFTGVTSGDY
YVEARIRPRNNSTTGNKQLYLIARAQDANNWYGAGFNVQGSTTSTRVAIGKMVAGTFTDN
IFARYNTPIEQGTTGGTDGVWYTVRMEMKGSSIVVYLNGQPVISGTDTSFANAGMIGLYT
TNKSFEIDDVKVGNPDVKPVQFTVSPLATTYSAEAGDLPYAVTVTAKDSLGATDTFTAVS
SDTSVVDVSISGNQVSLNPVGAGTASITLTSGSDSSKTHTILATIAPQFVQPSQTYDLSG
RVDPAVAEANAYVDTRLSITFDAPPVLGSTGRIRIFKVSDDSIVDTITLTGNTDSLGYSG
QGIYRIVKTNPLSISGNTLTIALDNAKLAYNTAYYVAIADGVVTGASLNGTAFVGLGKAA
GWSFTTKTAAPATGDVTVDDTGSADFRTVQGAINHVVQTVAKDTPATISVKNGDYRELLF
LRGKNNLMLQGESRNGVVIHYTNSEGVNSGTGASQAAGSPAGGRSVFLVETSDLLKLDSL
TLKNDTLIGSGGQAEVIYFNNDAGRLIATNATFISEQDTIQVKGYSWFYRSLIAGNVDFI
WGNNRAALFEESEIRTLGDSRGNGSGGYILQARTLSAADKGFVFLNSSLTRGAGPLGHTV
ADGVTWLARSGGSVSFFDNIVFVNTKMDVHINPAGWNINPMPNPATATATSGWREYGSMD
MGGTTLDVSQRVSASYQLSFGEIINSYCNRAQVFAAYNSSAGWNPLPADSTDCLNYGVSS
SSSSSSSAVSSSEAASSAIVVSSSSAPESSSASSSSAAASSESSSSAVASSEASSEASSA
ISSSEASSSASSVYVPVTTSWLPTYTELQSAVAAAPATNNNANFNLTASPVTIGGIKFYS
STAGSLRLHLNSAGTEYAVNYNGTSAKDDTVVAPVTFVEGGTQVNPSALNTAGGVTRFIS
VPFTPAATPVTLTVTYSNGSATAAGACQNGQVAIVDQTGKTWKVGTSCSNPAKTTLTATI
TDPTVSELFILMSRNGDSGGGIRIWQVDITR
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaccctgaacccggcgtcacccgtcgtgttgaacatcgcccgtttactgcaa
tccctggataccgatggtaatccggccaacgggatcactattagccctacggcagcccag
gcagcggcgccagtggatttcaacctgagcctgactcagtttgcggcctcgccggcggtg
actaatctgatcgccaattccggttcggtaaccacctcggtagtgtcagtgcagcaggcg
ttgacccatttgcgcgataccctggtggtaatcggtgtgccgattgaagagaacagcagt
tccgccggacagagttcagcgccggtggtggtgccaagcagctcatctggccagagcagt
acgcctgctgtgtcgagcagtacttccagccttgcgccctcatcgattgcttcgtctgtt
gcggcatcagtgacaccgtcttcggtagcggcttcggttgctgcctcaagtacaccagta
gttgtagcatcttcgacacctgcttcgtctgttgcagcatcagtgacaccttcgtccatc
gctgcctcgagtacatcggaagtggttgcgtcttccgtaccggcctcttcggtcgctgca
tcagtgactccgtcttcagtcgcggcgtccagcgagccagtagtagcgccgtcttccacg
gcggcgtcctctgaagcggtttcgtccgcagcggtggtggcatctacaagtgcccaatcg
agcatcgccccaagcgcctttgacgccgctaacggttgggcgtcagtgggtactaacaat
cttggtcacgcaggaaccaccggtggtgtgacggcggatgctgctcatacttatacagtg
actaaccgcaacgaattgctcgcggcgctctataccaatttggtaatcaacaacgacggc
agctttaccggtactgtggataccacgcccaaaattatctatatcgatggcaccgtaaat
ctgaatatgaacaaggcgctgatggagcagaccgaagcggattacatctgcccgattgat
ggcaccagtatcaaggtggcttacaacttcgaagactacaaaaacttctacgatcccaat
ggcgcctggggcaccaaggcggtatcgggcgatctggaaactgcacgcgtctgcgcttct
aacaagcaaaaagccgtggtccagattaaagtgggttccaacaccaccattattggcaag
aacaacaacgccaagattgtgcgcggccatgtgcgcctgagccctccctacgacaacatc
atcattcgcaacgtccacttcgaagatgccttcgatatgtttccgcagtgggaccctacc
gacagcggcggccgctggaactcgctctacgacaatatcagcgtcgatggcgcgacccat
gtgtggatcgaccactgtagcttcagcgatggtgccaaccacgacaagttgtatccgccg
gtatttgccgcgccttacaacctgccggaaatgaaagtccagcatcacgatggcgcggtg
gatgtgagcaaaaacgccaactacgtgaccctgtcctacaactatgtgcacgatcacgac
aagacccacctggtgggcagttcggacaccatcgccgcggacaacgggcccaagttcctt
aagctgaccatgcatcacaactacttcaaagatgtgacccagcgcttgccgcgcgtgcgc
atgggcatggtgcatctgtacaacaacctttatgacggccagctcaagccaactgacgtg
gatcgccactacggtttcagtgtaggtatggcgaccggtcaatttggcaagctttacgcc
gagagcaacgtgtttgagatagccgcctctaccgatggcgtgcaggcaacggtggaaaac
ctttacagtgtcagcttcaaagccaccagcagtgtgatcaacgcctgtaaggcggccagc
tataccgatgccgactgttccacgctcttctacgaaaccggcagcctgttgaacggtgca
ccggtagatatcatggccgccgccgtggccaatgccgctgcgcaaaccacaccgctggta
cttaattcagcccagacctattggatgccgtctagctactacagctataccctggatggc
accaacggtctgcgcgacgcaattatcgcgggggccggtgccggcctctgtgcggattgc
gccaacctgaccaaacctgcgccttcttcaagtagcagcgcgtcatcggttgccggtggt
tcagcgtcttctgcccccttaggtggtggctcctcgggttccagcaatagttcatcgtcg
gcttcttcttcagaggctcctatcgttatgaactgtggcgcggatgtgtatttctgcgat
gactttgctgcctcaagcgccagtaactggaacctgttgccggtcgcaggccccaccggg
gtatttgatctgtttacccagaacagcaaccagatgttgcgctataccgccgccagtgca
ggtggcgtattggcactggtaaaaccagcggcttttaccggtgtgaccagtggtgattat
tacgtagaggcaagaatccgcccgcgcaacaattcgacaacgggtaacaaacagctctac
ctcatcgcgcgcgctcaggatgccaataactggtatggcgccggctttaacgtgcagggt
tctaccaccagcacccgtgtggcgattggcaagatggtggcgggcacctttaccgacaac
attttcgcgcgctacaacaccccgatcgagcagggcactactggcggcaccgatggcgtc
tggtacacagtgcggatggaaatgaagggcagctccattgtggtctacctcaatggccag
ccagtgatcagcggcacagataccagcttcgccaacgccggtatgatcggcctttacacc
accaacaagtcctttgaaatcgacgatgtgaaagtgggcaatcccgatgtgaaaccagtg
cagttcacggtttcgccgctagcgaccacttactctgcagaggcgggcgacctgccttac
gcagtcaccgtcaccgccaaagacagcctgggcgctaccgacacttttactgcggtatcc
agtgatacctcggtggtggatgtgagcatcagcggcaatcaggtcagcctcaatccggtg
ggtgcgggcactgccagtatcaccctcaccagcggttccgactcgagcaagacccacaca
attttggccaccattgcgccccagttcgtccagccgagccagacgtatgacctgagcggg
cgcgttgatccggcggtggcggaagccaatgcctatgtggatacgcgcctgtcgatcacc
tttgacgcgccgccggtattgggcagcactggtcgcatccgtatcttcaaggtcagcgat
gactcgatcgtggataccatcaccctgaccggcaataccgatagcctgggctacagcggt
cagggcatctaccgtattgttaagaccaatccactctcaatcagcggaaataccctcaca
atcgcgctggataacgccaagttagcctataacacggcttactatgtggccattgctgat
ggcgtagtgaccggtgccagcctgaatggcacagcctttgtgggcctgggcaaggcagcg
ggttggagcttcaccaccaaaaccgcggcgcccgcgaccggcgatgtgactgtggatgac
actggcagcgccgatttccgcacggttcagggcgcaattaaccatgtggtgcaaacggtg
gcgaaagacacccccgcgaccatcagcgtgaaaaatggcgactatcgcgagctgttgttc
ctgcgcggtaagaacaacctcatgctgcagggtgaaagtcgtaacggcgtagttatccac
tacaccaacagcgaaggcgtcaattcggggactggcgccagccaggcggcgggttcgccg
gcgggtggtcgcagcgtgttcctagtggaaacttcggacttgctcaagctggacagtttg
accctcaaaaacgataccttgattggctcgggtggccaggcagaagtgatctacttcaat
aacgatgccggtcgtctgattgctactaacgcgacctttatttcggagcaggacaccatc
caggtgaaaggctacagctggttctaccgcagcctgatcgccggtaacgtggactttata
tggggcaataaccgcgcagcgctgtttgaagagagtgagattcgcaccctcggcgactct
cgcggcaatggcagcggcggctatatcctgcaggcgcgcaccctatcggcggcggataag
ggctttgtgttcctcaactccagccttacccgtggcgccggcccgctcggtcacacagtg
gcggatggcgttacctggttggcgcgcagcggcggcagcgtgagcttcttcgacaacata
gtgtttgtgaacaccaaaatggatgtgcatatcaatcccgccggttggaacatcaaccct
atgcctaacccggcgacggccacagccaccagcggctggcgcgagtacggcagcatggat
atgggcggcaccactttggatgtcagccagcgcgtcagtgccagctaccagttgtccttt
ggcgagatcatcaacagctactgcaatcgcgcgcaggtgtttgccgcttacaactccagc
gccggctggaacccgctgccggcggattccaccgactgtttgaactatggcgtgagcagc
tcatcaagcagctcgtccagcgcagtgagttccagtgaagcagcgagcagtgccatagtg
gtttcaagcagcagtgcgcctgagtcgagcagtgccagcagttccagcgccgccgccagc
agcgagagcagttcgagcgctgtggctagctctgaagccagcagtgaagccagctcggcc
atatccagcagtgaagccagctcttccgccagttctgtatatgtacctgtgactaccagc
tggctgccaacctatacggaattgcaatccgctgtagcggccgcgccagcgaccaataac
aatgccaacttcaatctgaccgcctcgccggtcaccattggggggatcaagttctactcc
tccacggcgggaagtctgcgcttgcatctgaacagtgccggcaccgaatacgccgttaac
tacaacggcacctcggcaaaagatgacacagttgtggcgccagtcactttcgttgaaggc
ggcactcaggtaaacccatctgcgctcaatacggcgggaggtgtgacccgctttatctct
gtgccattcactccggcggcaaccccggtgactttaacggttacttattccaacggcagc
gcaacggctgccggcgcttgtcaaaatggccaggtggcaatagttgatcaaaccggaaaa
acctggaaagtagggacttcttgcagcaatccagcgaaaacgaccctgacagcgaccatt
actgatccgaccgtatcagagttatttatcctgatgagccgcaatggtgacagcggcggc
ggcatccgtatttggcaagttgatatcacccgttaa
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integrated database retrieval system