Cellvibrio sp. KY-GH-1: D0C16_16935
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Entry
D0C16_16935 CDS
T06422
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ceg
Cellvibrio sp. KY-GH-1
Pathway
ceg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ceg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D0C16_16935 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceg03400
]
D0C16_16935 (recF)
DNA repair and recombination proteins [BR:
ceg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D0C16_16935 (recF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_27
AAA_13
ABC_tran
ATPase_2
AAA_22
AAA_16
nSTAND1
N-HEAT_ATR
Motif
Other DBs
NCBI-ProteinID:
QEY17519
UniProt:
A0A5J6PES1
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Position
complement(3940228..3941328)
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AA seq
366 aa
AA seq
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MTLNRLFIQNLRNLEGVDITPSAQVNLIFGENGSGKTSVLEAVNLLALGRSFRSHKHKPL
IRHHQNSFTVFGKVRVEDGSDVPIGINRTSEGLANFKVNGSMVPSAADLAAYLPVQVINS
ETFLLLEGSPQVRRQFIDWLVFHVEHGFFPAWKAIQRCLKHRNSLLRHDRIDPFELAPWD
KELVLLTEQIHEFRLESFRQFHEVFDELCKEFTKLDGVKLSYYRGWDKDKNYAEVLSASL
ERDQRIGYTQSGSHRADLRITINGQYAAETLSRGQQKLLVCALKIAQGCVFSRITGRKSV
YLVDDLPAELDEKHRALLVKWLATMGTQVFITGVDRDVLLASWLDKPEITPKLFHVEHGR
VVEAPY
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaccttaaatcgattatttattcaaaacttgcgcaacctcgagggggtggatatcact
ccttcagcgcaggtaaaccttatctttggcgaaaatggttccggaaaaaccagcgttttg
gaagcggtaaacttgttggccttgggaagatctttccgcagtcataagcataaacctctt
atcagacatcaccaaaattctttcacggtatttggcaaagtacgtgttgaagatggttcc
gatgttcctatcggaattaatcgaacgtcggaaggcctggctaatttcaaagttaacggt
tctatggttccatcggcggcagatttagccgcttatcttccggttcaggtaattaattct
gaaacttttttgctgttggaaggaagtcctcaggttagaaggcagtttatcgattggtta
gtgtttcacgtggaacatggatttttccctgcatggaaggcaattcagcgttgcctcaaa
caccgcaacagcctcttgcgccatgatagaatagacccctttgagcttgctccttgggat
aaggaattggtgctactcacagagcagattcacgaatttcgtttggaatcatttcgccag
tttcatgaagtatttgatgaactctgtaaggagtttactaaactggatggagttaaactg
agttactaccgtggttgggataaggataagaactacgctgaggtgttgtcagcctctcta
gagcgggatcaacgtatcggttatacacagtccggcagtcacagggcagatttacgcatc
accatcaacggtcaatatgctgcggagacactgtctcgcggtcagcagaagctcttagtc
tgcgcgctgaaaattgcccagggctgcgtattcagccgtatcacagggcgaaagtctgtt
tatttagtggatgacttaccagcagaattggatgaaaagcatcgcgcactattagttaaa
tggttggcgactatgggaacccaggtttttattaccggtgttgaccgtgatgtgcttctt
gccagttggcttgataaaccagagataacacctaaattgtttcacgtggaacatggtagg
gtagttgaagcaccttattag
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